Miyakogusa Predicted Gene
- Lj1g3v4118220.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4118220.3 Non Chatacterized Hit- tr|K3XIG9|K3XIG9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001691,35.97,2e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; FBOX,F-box domain, cyclin-like; A Recepto,CUFF.31968.3
(501 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024643 weakly similar to UniRef100_Q2HSX6 Cluster: Cy... 831 0.0
gnl|LJGI|TC80009 similar to UniRef100_Q2HSX6 Cluster: Cyclin-lik... 262 2e-69
>gnl|LJGI|GO024643 weakly similar to UniRef100_Q2HSX6 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (49%)
Length = 631
Score = 831 bits (419), Expect = 0.0
Identities = 471/495 (95%)
Strand = Plus / Plus
Query: 3 ggaggaagatcacattgacagatctctcttgaatttgcctgaacccattctggattgcat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 ggaggaagatcacattgacagatctctcttgaatttgcctgaacccattctggattgcat 88
Query: 63 cctcaaactcctctcaccaatcgagctcatcaaaatgtccatggtgtgcacttgtttaag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 cctcaaactcctctcaccaatcgagctcatcaaaatgtccatggtgtgcacttgtttaag 148
Query: 123 ggatgcatgtcgaagtgatcatttgtgggaaaaccacatcaaccagaaatggggtacaat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ggatgcatgtcgaagtgatcatttgtgggaaaaccacatcaaccagaaatggggtacaat 208
Query: 183 cgttggtgattttgctttcaaagagtggcaatggcacttaacaaaattcaagtcnnnnnn 242
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 209 cgttggtgattttgctttcaaagagtggcaatggcactcaacaaaattcaagtcagaaga 268
Query: 243 nnnnnnnnnnnnnnccctcttggatcaaaattgctcacttgggtctttctgtgggtcttg 302
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agaagaagaagaagccctcttggatcaaaattgctcacttgggtctttctgtgggtcttg 328
Query: 303 tcctttgccatgcactggctcatatttacaggattttaatcaacttaggaccttcttgcc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcctttgccatgcactggctcatatttacaggattttaatcaacttaggaccttcttgcc 388
Query: 363 aaataactccatgttggctctttatttctctctacagggtggcaagttttggtttccagc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aaataactccatgttggctctttatttctctctacagggtggcaagttttggtttccagc 448
Query: 423 tcaattttaccggggaccaagggttcgagacgccttatttcgccatgaacccacaagtca 482
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 449 tcaattttaccggggaccaagggttcgagacgccttatttcgctatgactccacaagtca 508
Query: 483 aaccttcacagcaag 497
|||||||||||||||
Sbjct: 509 aaccttcacagcaag 523
>gnl|LJGI|TC80009 similar to UniRef100_Q2HSX6 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (17%)
Length = 906
Score = 262 bits (132), Expect = 2e-69
Identities = 141/144 (97%)
Strand = Plus / Plus
Query: 354 cttcttgccaaataactccatgttggctctttatttctctctacagggtggcaagttttg 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttcttgccaaataactccatgttggctctttatttctctctacagggtggcaagttttg 60
Query: 414 gtttccagctcaattttaccggggaccaagggttcgagacgccttatttcgccatgaacc 473
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 61 gtttccagctcaattttaccggggaccaagggttcgagacgccttatttcgctatgactc 120
Query: 474 cacaagtcaaaccttcacagcaag 497
||||||||||||||||||||||||
Sbjct: 121 cacaagtcaaaccttcacagcaag 144