Miyakogusa Predicted Gene

Lj1g3v4118220.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4118220.2 Non Chatacterized Hit- tr|B6EDA1|B6EDA1_TRIUA
Putative cyclin-like F-box (Fragment) OS=Triticum
urar,46.43,0.0000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.31968.2
         (681 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO019394 weakly similar to UniRef100_Q2HSY2 Cluster: Cy...   337   5e-92

>gnl|LJGI|GO019394 weakly similar to UniRef100_Q2HSY2 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (45%)
          Length = 694

 Score =  337 bits (170), Expect = 5e-92
 Identities = 280/316 (88%), Gaps = 3/316 (0%)
 Strand = Plus / Plus

                                                                       
Query: 10  caaaaccaaagtaaaagaacatgtggctcttttagtggtgtttggccttctctaagcctt 69
           ||||| ||||||| | || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 caaaatcaaagtagaggatcatgtggctcttttagtggtgtttggccttctctaagcctt 435

                                                                       
Query: 70  cattcttatttggaaaattttggagatttgactagtttgtttcaaaaatattccaaaatg 129
            ||||||||||| |||||||||| ||  | |||||||| |||||||| | | ||||||||
Sbjct: 436 aattcttatttgaaaaattttggggacatcactagtttatttcaaaattgtcccaaaatg 495

                                                                       
Query: 130 gctctgcttgtttgtcttgagagtggtcgcttctggtttcctgcccaagttta---taag 186
           |||||| ||||||||||||||||||||||||||||||||||||| |||| |||   ||||
Sbjct: 496 gctctgtttgtttgtcttgagagtggtcgcttctggtttcctgctcaagcttatcttaag 555

                                                                       
Query: 187 agagtaccactgtattgttatgatgccatagtcagctatgactctaaaacagacaccttc 246
           ||| | ||||| |||| |||||||| ||| || || ||| ||||| ||||||||||||||
Sbjct: 556 agaatgccactatatttttatgatgtcattgttagttataactctgaaacagacaccttc 615

                                                                       
Query: 247 cgagcaaggtccccaaataatgggtggcgaatgattgagggaaacattgagtgggatagg 306
            |||||||||||||||| || | |||||||||||||| | ||||||||||||||||||||
Sbjct: 616 agagcaaggtccccaaacaacgagtggcgaatgattgggagaaacattgagtgggatagg 675

                           
Query: 307 ttgagatcatcaccag 322
           ||||||||||||||||
Sbjct: 676 ttgagatcatcaccag 691