Miyakogusa Predicted Gene
- Lj1g3v4107040.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4107040.2 tr|F2CX46|F2CX46_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,44.35,3e-18,ARV1,Arv1 protein; seg,NULL; Arv1,Arv1
protein,CUFF.31951.2
(750 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS360240 weakly similar to UniRef100_Q9MAN2 Cluster: T2... 466 e-130
gnl|LJGI|BP053170 weakly similar to UniRef100_Q9MAN2 Cluster: T2... 309 1e-83
gnl|LJGI|FS333626 similar to UniRef100_Q9MAN2 Cluster: T25K16.2;... 272 3e-72
>gnl|LJGI|FS360240 weakly similar to UniRef100_Q9MAN2 Cluster: T25K16.2; n=1;
Arabidopsis thaliana|Rep: T25K16.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (13%)
Length = 769
Score = 466 bits (235), Expect = e-130
Identities = 235/235 (100%)
Strand = Plus / Minus
Query: 516 ggtctgggagtttccatcatctgcgatcttcatcattgaattattttgtttatcgtctaa 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ggtctgggagtttccatcatctgcgatcttcatcattgaattattttgtttatcgtctaa 395
Query: 576 tgcagtggcattaaaagtgatgactgaatcaacgatgagccgatgtgtttgtacctgcct 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgcagtggcattaaaagtgatgactgaatcaacgatgagccgatgtgtttgtacctgcct 335
Query: 636 ctgcgcatatgctacaaagtttttggtcacttgtgtaccggagctcatgttgttggggga 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctgcgcatatgctacaaagtttttggtcacttgtgtaccggagctcatgttgttggggga 275
Query: 696 attaattcaaggatggagtcatatgccctcctcattgtctttaaagccttcttga 750
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 attaattcaaggatggagtcatatgccctcctcattgtctttaaagccttcttga 220
Score = 143 bits (72), Expect = 2e-33
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 447 caggtgcaatgaccttttgcttgtacttatgatttcatgttatttcaagatctttcttgt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 caggtgcaatgaccttttgcttgtacttatgatttcatgttatttcaagatctttcttgt 585
Query: 507 tgccatgatggt 518
||||||||||||
Sbjct: 584 tgccatgatggt 573
>gnl|LJGI|BP053170 weakly similar to UniRef100_Q9MAN2 Cluster: T25K16.2; n=1;
Arabidopsis thaliana|Rep: T25K16.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (9%)
Length = 462
Score = 309 bits (156), Expect = 1e-83
Identities = 159/160 (99%)
Strand = Plus / Minus
Query: 591 agtgatgactgaatcaacgatgagccgatgtgtttgtacctgcctctgcgcatatgctac 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agtgatgactgaatcaacgatgagccgatgtgtttgtacctgcctctgcgcatatgctac 330
Query: 651 aaagtttttggtcacttgtgtaccggagctcatgttgttgggggaattaattcaaggatg 710
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 caagtttttggtcacttgtgtaccggagctcatgttgttgggggaattaattcaaggatg 270
Query: 711 gagtcatatgccctcctcattgtctttaaagccttcttga 750
||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gagtcatatgccctcctcattgtctttaaagccttcttga 230
>gnl|LJGI|FS333626 similar to UniRef100_Q9MAN2 Cluster: T25K16.2; n=1; Arabidopsis
thaliana|Rep: T25K16.2 - Arabidopsis thaliana (Mouse-ear
cress), partial (14%)
Length = 734
Score = 272 bits (137), Expect = 3e-72
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 135 gattcttgtgatagatttattgcttcataagcccaaggcctatagacatctcctttacaa 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gattcttgtgatagatttattgcttcataagcccaaggcctatagacatctcctttacaa 498
Query: 195 tgtcatcaatcaagaaaccttgaagtttcagggactactctggaaatcagctatcacttt 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgtcatcaatcaagaaaccttgaagtttcagggactactctggaaatcagctatcacttt 558
Query: 255 tcttctttttgatgctt 271
|||||||||||||||||
Sbjct: 559 tcttctttttgatgctt 575
Score = 268 bits (135), Expect = 5e-71
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 1 atgggttacacatgcattcagtgcgggtttcccatcaaaacactttacattcagtattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 atgggttacacatgcattcagtgcgggtttcccatcaaaacactttacattcagtattca 264
Query: 61 ccaggcaacattcgcttgttgaaatgcgagaattgcaaggctgtggcagatgaatacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaggcaacattcgcttgttgaaatgcgagaattgcaaggctgtggcagatgaatacata 324
Query: 121 gaatgtgaaatcatg 135
|||||||||||||||
Sbjct: 325 gaatgtgaaatcatg 339
Score = 103 bits (52), Expect = 2e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 272 acaaatgtttgatcttggaaaacagcaagggaaaaatgagttcatcaatgag 323
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 acaaatgtttgatcttggaaaacagcaagggaaaaatgagttcatcaatgag 734