Miyakogusa Predicted Gene
- Lj1g3v4106960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4106960.1 tr|Q673E5|Q673E5_MEDTR Auxin efflux carrier
component OS=Medicago truncatula GN=PIN10 PE=4 SV=1,91.95,0,2a69:
auxin efflux carrier,Auxin efflux carrier, plant type; Mem_trans,Auxin
efflux carrier; SUBFAMI,CUFF.31944.1
(1782 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59920 homologue to UniRef100_A2Q4I5 Cluster: Auxin Ef... 1170 0.0
gnl|LJGI|TC62842 homologue to UniRef100_A7PT87 Cluster: Chromoso... 1072 0.0
gnl|LJGI|FS335769 homologue to UniRef100_A2Q4I5 Cluster: Auxin E... 872 0.0
gnl|LJGI|GO027806 homologue to UniRef100_Q8H0E0 Cluster: PIN1-li... 204 1e-51
gnl|LJGI|TC74212 homologue to UniRef100_Q257B0 Cluster: Auxin ef... 131 2e-29
gnl|LJGI|FS327584 homologue to UniRef100_Q84YG8 Cluster: Auxin e... 117 2e-25
gnl|LJGI|TC66383 homologue to UniRef100_Q8GV76 Cluster: Auxin ef... 92 1e-17
gnl|LJGI|FS353913 homologue to UniRef100_Q84YG8 Cluster: Auxin e... 56 8e-07
>gnl|LJGI|TC59920 homologue to UniRef100_A2Q4I5 Cluster: Auxin Efflux Carrier; n=2;
Medicago truncatula|Rep: Auxin Efflux Carrier - Medicago
truncatula (Barrel medic), partial (34%)
Length = 760
Score = 1170 bits (590), Expect = 0.0
Identities = 590/590 (100%)
Strand = Plus / Plus
Query: 1 atgataagcgcttctgacttgtaccatgttctcactgcggtggtgccactctacgtggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atgataagcgcttctgacttgtaccatgttctcactgcggtggtgccactctacgtggct 230
Query: 61 atgatcctcgcctacggctcagtgaaatggtggaaaatcttcagtccagaccagtgctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atgatcctcgcctacggctcagtgaaatggtggaaaatcttcagtccagaccagtgctct 290
Query: 121 ggcatcaaccgttttgttgctctgttcgcagttcctctgctttccttccacttcatctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggcatcaaccgttttgttgctctgttcgcagttcctctgctttccttccacttcatctcc 350
Query: 181 accaacaacccctacgccatgaactacaggttcatcgctgctgattctcttcagaaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 accaacaacccctacgccatgaactacaggttcatcgctgctgattctcttcagaaaacc 410
Query: 241 atagtccttgcagttctgctaatctggtcaagaacaagctcaagaggctctctggaatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atagtccttgcagttctgctaatctggtcaagaacaagctcaagaggctctctggaatgg 470
Query: 301 tccatcactctgttttccctgtcaacactgcccaacactctggtcatggggattccattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tccatcactctgttttccctgtcaacactgcccaacactctggtcatggggattccattg 530
Query: 361 ctgaaggggatgtatggtgatgcatcagggacattgatggtgcaaatcgtggtgcttcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ctgaaggggatgtatggtgatgcatcagggacattgatggtgcaaatcgtggtgcttcag 590
Query: 421 tgtatcatctggtacactctgatgctgttcttgtttgaatacagaggagccaggcttctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tgtatcatctggtacactctgatgctgttcttgtttgaatacagaggagccaggcttctc 650
Query: 481 attgtggagcagtttcctgacactgcagggtcgattatctcgttcaaggtggattctgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 attgtggagcagtttcctgacactgcagggtcgattatctcgttcaaggtggattctgat 710
Query: 541 attctctcgcttgatgggaaagagcctctgcagactgaggctgaggttgg 590
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 attctctcgcttgatgggaaagagcctctgcagactgaggctgaggttgg 760
>gnl|LJGI|TC62842 homologue to UniRef100_A7PT87 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 785
Score = 1072 bits (541), Expect = 0.0
Identities = 547/549 (99%)
Strand = Plus / Plus
Query: 1234 cacccaaaagcacagggagaatccaaaactgccaccaacatgccacctgctagtgtcatg 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacccaaaagcacagggagaatccaaaactgccaccaacatgccacctgctagtgtcatg 60
Query: 1294 actaggctcattttgatcatggtgtggagaaagctgattaggaatcctaacacttactct 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actaggctcattttgatcatggtgtggagaaagctgattaggaatcctaacacttactct 120
Query: 1354 agccttattggtctcacttggtctttggtctcattcaagtggaatgttgttatgccagca 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agccttattggtctcacttggtctttggtctcattcaagtggaatgttgttatgccagca 180
Query: 1414 attgttgctaaatcaatatcaattctatctgatgcaggccttggaatggcaatgtttagt 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attgttgctaaatcaatatcaattctatctgatgcaggccttggaatggcaatgtttagt 240
Query: 1474 cttgggttgttcatggcgttgcagccaaagatcattgcttgtggaaactcggttgctgca 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttgggttgttcatggcgttgcagccaaagatcattgcttgtggaaactcggttgctgca 300
Query: 1534 tttactatggcagttcggttcctcactggccctgcagtcatggccgttgcttcaattgtt 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttactatggcagttcggttcctcactggccctgcagtcatggccgttgcttcaattgtt 360
Query: 1594 gtagggctcaggggtgttctgttgcacatagctattgtacaggctgctctgcctcaagga 1653
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 361 gtagggctcaggggtgttctgttgcacatagctattgtacaggctgctttgcctcaagga 420
Query: 1654 attgtcccatttgtgtttgctaaggaatacaatgttcatcctgacattctcagcactggg 1713
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 421 attgtcccatttgtgtttgctaaggaatacaatgttcatcctgacattttcagcactggg 480
Query: 1714 gttatatttggaatgctgattgctcttcccattactcttgtttactacattttgctgggg 1773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttatatttggaatgctgattgctcttcccattactcttgtttactacattttgctgggg 540
Query: 1774 ctttgaagc 1782
|||||||||
Sbjct: 541 ctttgaagc 549
>gnl|LJGI|FS335769 homologue to UniRef100_A2Q4I5 Cluster: Auxin Efflux Carrier; n=2;
Medicago truncatula|Rep: Auxin Efflux Carrier - Medicago
truncatula (Barrel medic), partial (26%)
Length = 665
Score = 872 bits (440), Expect = 0.0
Identities = 440/440 (100%)
Strand = Plus / Plus
Query: 1 atgataagcgcttctgacttgtaccatgttctcactgcggtggtgccactctacgtggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atgataagcgcttctgacttgtaccatgttctcactgcggtggtgccactctacgtggct 285
Query: 61 atgatcctcgcctacggctcagtgaaatggtggaaaatcttcagtccagaccagtgctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atgatcctcgcctacggctcagtgaaatggtggaaaatcttcagtccagaccagtgctct 345
Query: 121 ggcatcaaccgttttgttgctctgttcgcagttcctctgctttccttccacttcatctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggcatcaaccgttttgttgctctgttcgcagttcctctgctttccttccacttcatctcc 405
Query: 181 accaacaacccctacgccatgaactacaggttcatcgctgctgattctcttcagaaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 accaacaacccctacgccatgaactacaggttcatcgctgctgattctcttcagaaaacc 465
Query: 241 atagtccttgcagttctgctaatctggtcaagaacaagctcaagaggctctctggaatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 atagtccttgcagttctgctaatctggtcaagaacaagctcaagaggctctctggaatgg 525
Query: 301 tccatcactctgttttccctgtcaacactgcccaacactctggtcatggggattccattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tccatcactctgttttccctgtcaacactgcccaacactctggtcatggggattccattg 585
Query: 361 ctgaaggggatgtatggtgatgcatcagggacattgatggtgcaaatcgtggtgcttcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctgaaggggatgtatggtgatgcatcagggacattgatggtgcaaatcgtggtgcttcag 645
Query: 421 tgtatcatctggtacactct 440
||||||||||||||||||||
Sbjct: 646 tgtatcatctggtacactct 665
>gnl|LJGI|GO027806 homologue to UniRef100_Q8H0E0 Cluster: PIN1-like auxin transport
protein; n=1; Cucumis sativus|Rep: PIN1-like auxin
transport protein - Cucumis sativus (Cucumber), partial
(27%)
Length = 766
Score = 204 bits (103), Expect = 1e-51
Identities = 394/491 (80%)
Strand = Plus / Minus
Query: 1285 agtgtcatgactaggctcattttgatcatggtgtggagaaagctgattaggaatcctaac 1344
||||| ||||| ||||| || |||||||||||||||||||| || || ||||| || |||
Sbjct: 664 agtgtgatgacaaggctgatattgatcatggtgtggagaaaacttatcaggaaccccaac 605
Query: 1345 acttactctagccttattggtctcacttggtctttggtctcattcaagtggaatgttgtt 1404
|| ||||| ||||| || ||||| |||||||| | | ||||||| |||||||||||
Sbjct: 604 acctactccagcctaatcggtctaacttggtcactcatttcattcaggtggaatgttgaa 545
Query: 1405 atgccagcaattgttgctaaatcaatatcaattctatctgatgcaggccttggaatggca 1464
||||| || || |||| || || || || || | || |||||||| || || |||||
Sbjct: 544 atgcctgccatcattgcaaagtctatttccatattgtcagatgcagggctcggcatggcc 485
Query: 1465 atgtttagtcttgggttgttcatggcgttgcagccaaagatcattgcttgtggaaactcg 1524
|||||||||||||||||||||||||| ||||| |||||||| || || |||||||| ||
Sbjct: 484 atgtttagtcttgggttgttcatggctttgcaaccaaagatgatagcatgtggaaattcc 425
Query: 1525 gttgctgcatttactatggcagttcggttcctcactggccctgcagtcatggccgttgct 1584
| || || ||| | ||||| || | ||||| || || || || |||||||| | ||||
Sbjct: 424 atagcagctttttcaatggctgtgagattccttacaggtccggctgtcatggcagctgct 365
Query: 1585 tcaattgttgtagggctcaggggtgttctgttgcacatagctattgtacaggctgctctg 1644
|| |||| ||| || ||||| |||||||| || ||| | || ||||| ||||| |||||
Sbjct: 364 tccattgctgttggactcagaggtgttctcttacacgttgccattgttcaggcagctctt 305
Query: 1645 cctcaaggaattgtcccatttgtgtttgctaaggaatacaatgttcatcctgacattctc 1704
|| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 304 ccacaaggaattgtcccatttgtgtttgccaaggaatacaatgtacatcctgatattctt 245
Query: 1705 agcactggggttatatttggaatgctgattgctcttcccattactcttgtttactacatt 1764
|| || || ||||| ||||| ||| |||| || | || || || || ||||| |||||
Sbjct: 244 agtacaggtgttatttttgggatgttgatcgcattgcctataacgctggtttattacatc 185
Query: 1765 ttgctggggct 1775
|||||||||||
Sbjct: 184 ttgctggggct 174
>gnl|LJGI|TC74212 homologue to UniRef100_Q257B0 Cluster: Auxin efflux carrier; n=1;
Lupinus albus|Rep: Auxin efflux carrier - Lupinus albus
(White lupin), partial (43%)
Length = 1022
Score = 131 bits (66), Expect = 2e-29
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 55 gtggctatgatcctcgcctacggctcagtgaaatggtggaaaatcttcagtccagaccag 114
||||||||||| | |||||||||||||||||||||||||| |||||| || |||||
Sbjct: 242 gtggctatgatattggcctacggctcagtgaaatggtggaagatcttctcccctgaccaa 301
Query: 115 tgctctggcatcaaccgttttgttgctctgttcgcagttcctctgctttccttccacttc 174
||||||||||||||||| ||||||||||| ||||| |||||||| ||||| ||||| |||
Sbjct: 302 tgctctggcatcaaccgctttgttgctcttttcgcggttcctctactttctttccatttc 361
Query: 175 atctccaccaacaa 188
||| || |||||||
Sbjct: 362 atcgcctccaacaa 375
Score = 105 bits (53), Expect = 9e-22
Identities = 92/105 (87%)
Strand = Plus / Plus
Query: 691 actcctcgtccttcaaacttgaccaatgctgagatttactctctgcaatcttccaggaat 750
|||||||| |||||||| | |||||||||||||| |||||||| ||||| || |||||
Sbjct: 887 actcctcgcccttcaaatctcaccaatgctgagatatactctctacaatcctcaaggaac 946
Query: 751 ccaactccaagagggtctagcttcaaccacactgatttctactcc 795
|||||||||||||| || | |||||||||||| ||||||||||||
Sbjct: 947 ccaactccaagaggctcaaacttcaaccacacagatttctactcc 991
Score = 61.9 bits (31), Expect = 1e-08
Identities = 112/139 (80%)
Strand = Plus / Plus
Query: 328 ctgcccaacactctggtcatggggattccattgctgaaggggatgtatggtgatgcatca 387
||||| ||||| |||| ||||| || || ||||| || ||||||||||| || |||
Sbjct: 515 ctgccaaacacgttggtgatgggtatcccgttgctcaaagggatgtatggcgagttctca 574
Query: 388 gggacattgatggtgcaaatcgtggtgcttcagtgtatcatctggtacactctgatgctg 447
|||| |||||||| ||||| || || || ||||| || ||||||||||| ||||||||
Sbjct: 575 gggagtttgatggttcaaattgttgtcctccagtgcattatctggtacaccttgatgctg 634
Query: 448 ttcttgtttgaatacagag 466
|||||||| || |||||||
Sbjct: 635 ttcttgttcgagtacagag 653
>gnl|LJGI|FS327584 homologue to UniRef100_Q84YG8 Cluster: Auxin efflux carrier
protein; n=1; Medicago truncatula|Rep: Auxin efflux
carrier protein - Medicago truncatula (Barrel medic),
partial (34%)
Length = 642
Score = 117 bits (59), Expect = 2e-25
Identities = 125/147 (85%)
Strand = Plus / Plus
Query: 87 atggtggaaaatcttcagtccagaccagtgctctggcatcaaccgttttgttgctctgtt 146
||||||||||||||||| |||||||| ||||||||||| |||||||||||||| | ||
Sbjct: 4 atggtggaaaatcttcacaccagaccaatgctctggcataaaccgttttgttgcagtatt 63
Query: 147 cgcagttcctctgctttccttccacttcatctccaccaacaacccctacgccatgaacta 206
|||||||| || ||||||||||||||||||||| |||| |||| || || ||||||||
Sbjct: 64 tgcagttccacttctttccttccacttcatctcctccaatgacccttatgctatgaacta 123
Query: 207 caggttcatcgctgctgattctcttca 233
| ||||| || |||||||| |||||
Sbjct: 124 ccacttcatagcagctgattcccttca 150
Score = 109 bits (55), Expect = 6e-23
Identities = 151/183 (82%)
Strand = Plus / Plus
Query: 430 tggtacactctgatgctgttcttgtttgaatacagaggagccaggcttctcattgtggag 489
||||||||||| ||||| ||| ||||||||||||||||||| | ||||||||| |||
Sbjct: 347 tggtacactctcatgctattcatgtttgaatacagaggagctaagcttctcataacagag 406
Query: 490 cagtttcctgacactgcagggtcgattatctcgttcaaggtggattctgatattctctcg 549
||||| ||||| ||||||||||| || | ||| |||| ||| ||||||||| || ||||
Sbjct: 407 cagttccctgaaactgcagggtcaatcacctccttcagggttgattctgatgttgtctca 466
Query: 550 cttgatgggaaagagcctctgcagactgaggctgaggttggagaagatggaaagcttcat 609
|| |||| | |||||| |||| || || || ||| ||||||||||||| |||||||||
Sbjct: 467 ctcaatggaagagagccattgcaaacagatgcagagattggagaagatgggaagcttcat 526
Query: 610 gtt 612
|||
Sbjct: 527 gtt 529
>gnl|LJGI|TC66383 homologue to UniRef100_Q8GV76 Cluster: Auxin efflux carrier
protein; n=1; Medicago truncatula|Rep: Auxin efflux
carrier protein - Medicago truncatula (Barrel medic),
partial (23%)
Length = 707
Score = 91.7 bits (46), Expect = 1e-17
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 145 ttcgcagttcctctgctttccttccacttcatctccaccaacaacccctacgccatgaac 204
||||| ||||| || ||||||||||| ||||| |||||||||||||| |||| ||||||
Sbjct: 395 ttcgcggttccactcctttccttccatttcatttccaccaacaacccttacgaaatgaac 454
Query: 205 tacaggttcatcgctgctgattctcttcagaaaa 238
| ||||||||||||||| ||| | ||||||||||
Sbjct: 455 ttcaggttcatcgctgcagatacacttcagaaaa 488
>gnl|LJGI|FS353913 homologue to UniRef100_Q84YG8 Cluster: Auxin efflux carrier protein;
n=1; Medicago truncatula|Rep: Auxin efflux carrier
protein - Medicago truncatula (Barrel medic), partial
(11%)
Length = 477
Score = 56.0 bits (28), Expect = 8e-07
Identities = 85/104 (81%)
Strand = Plus / Minus
Query: 1627 attgtacaggctgctctgcctcaaggaattgtcccatttgtgtttgctaaggaatacaat 1686
||||| ||||||||||| || || || || || || ||||| ||||| || |||||||||
Sbjct: 423 attgttcaggctgctcttccccagggtatcgttccctttgtttttgccaaagaatacaat 364
Query: 1687 gttcatcctgacattctcagcactggggttatatttggaatgct 1730
| ||||| || || ||||| || | ||||||||||||||||||
Sbjct: 363 ctccatccagatatactcagtacagcggttatatttggaatgct 320