Miyakogusa Predicted Gene

Lj1g3v4106950.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4106950.2 Non Chatacterized Hit- tr|G7KPM2|G7KPM2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,45.74,0,seg,NULL; DUF659,Domain of unknown function DUF659;
Dimer_Tnp_hAT,HAT dimerisation; SUBFAMILY NOT NA,CUFF.31940.2
         (2208 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593580 similar to UniRef100_Q2NNX0 Cluster: ORF63 pep...    82   2e-14

>gnl|LJGI|DC593580 similar to UniRef100_Q2NNX0 Cluster: ORF63 peptide; n=1; Hyphantria
           cunea nucleopolyhedrovirus|Rep: ORF63 peptide -
           Hyphantria cunea nuclear polyhedrosis virus (HcNPV),
           partial (13%)
          Length = 452

 Score = 81.8 bits (41), Expect = 2e-14
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 51  tggtggaggtgttgtccttgggagtggagtatctaaggtgcagaagagtgcttgtgg 107
           ||||||| |||||||||||  ||||||||||||| ||||||||||||||||||||||
Sbjct: 292 tggtggatgtgttgtccttttgagtggagtatctgaggtgcagaagagtgcttgtgg 348