Miyakogusa Predicted Gene

Lj1g3v4104820.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4104820.1 Non Chatacterized Hit- tr|I1LDI8|I1LDI8_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,79.59,0,ABC_TRANSPORTER_2,ABC transporter-like; ABC_TM1F,ABC
transporter, integral membrane type 1; ATPases ,CUFF.31982.1
         (2709 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Ch...   161   3e-38
gnl|LJGI|AU089009 similar to UniRef100_A7QTS7 Cluster: Chromosom...   151   3e-35

>gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Chromosome undetermined
            scaffold_171, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_171, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (5%)
          Length = 557

 Score =  161 bits (81), Expect = 3e-38
 Identities = 129/145 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2472 cctacaagctgctccttatcaacatttgctgacctcaagcaaagaatttcaggaacttgt 2531
            ||||||||||||||||||||| ||| |  ||||||||||| ||| ||||||||| || ||
Sbjct: 365  cctacaagctgctccttatcaccatctattgacctcaagccaaggatttcaggatctagt 424

                                                                        
Query: 2532 gaatgctcacaaagagaccgctggttctgaccggcttgtggatgttacttcttcccaggg 2591
             |||||||||||||| || |||||||||||||||||||| |||||||||||||||||| |
Sbjct: 425  caatgctcacaaagaaactgctggttctgaccggcttgtagatgttacttcttcccagag 484

                                     
Query: 2592 acattcaaattgtgctagagagatt 2616
            || |||||||| || ||||||||||
Sbjct: 485  accttcaaattctggtagagagatt 509


>gnl|LJGI|AU089009 similar to UniRef100_A7QTS7 Cluster: Chromosome undetermined
            scaffold_171, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_171, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (5%)
          Length = 209

 Score =  151 bits (76), Expect = 3e-35
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2196 gtttccccatggtgatctcactgaaataggcgagagaggggttaacctgagtggaggtca 2255
            ||||||||||||||| |||||||||||||| || ||||| || ||||| |||||||| ||
Sbjct: 3    gtttccccatggtgacctcactgaaataggtgaaagaggagtaaacctcagtggaggaca 62

                                                                        
Query: 2256 gaagcagcgaattcaactggcacgtgctctatataagaatgctgatatatatctcttgga 2315
             ||||||||| ||||||| || |||||||| ||| | ||||||||| ||||||| |||||
Sbjct: 63   aaagcagcgagttcaactcgcccgtgctctttatcaaaatgctgatgtatatcttttgga 122

                                                                  
Query: 2316 tgatccatttagtgctgttgatgcacaaactgccacaaatttgtttactgaata 2369
            ||||||| | | |||||||||||| || |||||  |||||||||| | ||||||
Sbjct: 123  tgatccantcantgctgttgatgcgcatactgcttcaaatttgttcaatgaata 176