Miyakogusa Predicted Gene
- Lj1g3v4103630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4103630.1 tr|E0CRP9|E0CRP9_VITVI Queuine
tRNA-ribosyltransferase OS=Vitis vinifera GN=VIT_18s0001g06460 PE=3
S,90.23,0,tRNA-guanine transglycosylase,Queuine/other
tRNA-ribosyltransferase; Q_tRNA_Tgt,Queuine tRNA-ribosyl,CUFF.31938.1
(1392 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS329226 homologue to UniRef100_Q6K4A3 Cluster: Queuine... 1066 0.0
gnl|LJGI|FS355531 similar to UniRef100_A7NUU0 Cluster: Queuine t... 963 0.0
>gnl|LJGI|FS329226 homologue to UniRef100_Q6K4A3 Cluster: Queuine
tRNA-ribosyltransferase; n=1; Oryza sativa Japonica
Group|Rep: Queuine tRNA-ribosyltransferase - Oryza
sativa subsp. japonica (Rice), partial (52%)
Length = 742
Score = 1066 bits (538), Expect = 0.0
Identities = 538/538 (100%)
Strand = Plus / Plus
Query: 282 aggaacaattaaaggattgacaaatagccagctggaggaaattggttgccaaataatact 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aggaacaattaaaggattgacaaatagccagctggaggaaattggttgccaaataatact 264
Query: 342 tggaaatacttatcacttggaacttcgacctacttcggagcttcttgatgaagtcggtgg 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggaaatacttatcacttggaacttcgacctacttcggagcttcttgatgaagtcggtgg 324
Query: 402 tcttcacaaatttatgaattggaaacgggctctgcttaccgactctggcggatttcaaat 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcttcacaaatttatgaattggaaacgggctctgcttaccgactctggcggatttcaaat 384
Query: 462 ggtttcactgttgcatcttgctgatatcacagaaaaaggtgtgacgtttcagtcaccagt 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtttcactgttgcatcttgctgatatcacagaaaaaggtgtgacgtttcagtcaccagt 444
Query: 522 agatggaaagcccatgcttctgactcctgaggaatcaattcagatacaaaatagaattgg 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agatggaaagcccatgcttctgactcctgaggaatcaattcagatacaaaatagaattgg 504
Query: 582 agctgatatcattatggctcttgatgatgttgtaaagaccaccatcactggtccaagagt 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agctgatatcattatggctcttgatgatgttgtaaagaccaccatcactggtccaagagt 564
Query: 642 ggaggaagctatgtatcgaacacttagatggatagacagatgtatagaagctcacaagag 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggaggaagctatgtatcgaacacttagatggatagacagatgtatagaagctcacaagag 624
Query: 702 acctcatgatcagaacttgtttggtattgtgcaaggtggtttggatcctgtattgaggga 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acctcatgatcagaacttgtttggtattgtgcaaggtggtttggatcctgtattgaggga 684
Query: 762 tatctgtgtcaaaggtctggtggagcgcaatttgcccggctatgctattggtggtctt 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tatctgtgtcaaaggtctggtggagcgcaatttgcccggctatgctattggtggtctt 742
Score = 311 bits (157), Expect = 6e-84
Identities = 160/161 (99%)
Strand = Plus / Plus
Query: 123 aggatccaccattactagtttgctctcccctgcttccgaaactaacctcatggcgcttac 182
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 23 aggatccaccattactagtttgctctcccctgcttccgaaactaacctgatggcgcttac 82
Query: 183 ttttgagatacttggcaagttcaaccgtgctcgtgccgctagattgacactccctcattt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ttttgagatacttggcaagttcaaccgtgctcgtgccgctagattgacactccctcattt 142
Query: 243 tgtatgccaaacgcctttgttcatgcctgtgggcacacaag 283
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tgtatgccaaacgcctttgttcatgcctgtgggcacacaag 183
>gnl|LJGI|FS355531 similar to UniRef100_A7NUU0 Cluster: Queuine tRNA-ribosyltransferase;
n=1; Vitis vinifera|Rep: Queuine tRNA-ribosyltransferase
- Vitis vinifera (Grape), partial (41%)
Length = 736
Score = 963 bits (486), Expect = 0.0
Identities = 489/490 (99%)
Strand = Plus / Minus
Query: 903 tatgggtgttggttatccacttgacattgttgtttgtagtgcattgggtgctgacatgta 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tatgggtgttggttatccacttgacattgttgtttgtagtgcattgggtgctgacatgta 677
Query: 963 tgattgtgtttatcctacccgtacagcacgctttggcactgctctcgttcctgagggagt 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgattgtgtttatcctacccgtacagcacgctttggcactgctctcgttcctgagggagt 617
Query: 1023 gttgaaacttaaacacagagcaatggctgatgacacccgtccgattgatcctacttgctc 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gttgaaacttaaacacagagcaatggctgatgacacccgtccgattgatcctacttgctc 557
Query: 1083 ttgcatggtttgcaagacctacaccagggcttacctccattgccttgtgacaaaagatgc 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttgcatggtttgcaagacctacaccagggcttacctccattgccttgtgacaaaagatgc 497
Query: 1143 tatggggtctcagcttgtgtcataccataatttatattacatgatgcagcttagtaggaa 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tatggggtctcagcttgtgtcataccataatttatattacatgatgcagcttagtaggaa 437
Query: 1203 tctgcactcttcaatagttgaaggaagattccaagagtttgtatgcgaatttctgcagaa 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tctgcactcttcaatagttgaaggaagattccaagagtttgtatgcgaatttctgcagaa 377
Query: 1263 aatgttccggaaaggtgatgttcctgaatgggtctgcgatgctatggaggtggctggaat 1322
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aatgttcccgaaaggtgatgttcctgaatgggtctgcgatgctatggaggtggctggaat 317
Query: 1323 cgacatttcttcttgctgtgctactccattttcatcatgccaagaatatgattccggaaa 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cgacatttcttcttgctgtgctactccattttcatcatgccaagaatatgattccggaaa 257
Query: 1383 gttgtcagaa 1392
||||||||||
Sbjct: 256 gttgtcagaa 247