Miyakogusa Predicted Gene

Lj1g3v4093530.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4093530.1 CUFF.31912.1
         (312 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC595079                                                     391   e-108
gnl|LJGI|TC64382 similar to UniRef100_A7PI27 Cluster: Chromosome...   391   e-108
gnl|LJGI|AU089377                                                     379   e-105
gnl|LJGI|TC74621 similar to UniRef100_Q6GLA3 Cluster: Transforme...    78   4e-14

>gnl|LJGI|DC595079 
          Length = 535

 Score =  391 bits (197), Expect = e-108
 Identities = 197/197 (100%)
 Strand = Plus / Minus

                                                                       
Query: 78  tttctttgtttgcagagccaccaccagaacagagacatcactccttcaaaggaacactcc 137
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tttctttgtttgcagagccaccaccagaacagagacatcactccttcaaaggaacactcc 246

                                                                       
Query: 138 tccacaccggcgccattgtccccaccaaattaaaaacggattaactgaacagtgcggcag 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tccacaccggcgccattgtccccaccaaattaaaaacggattaactgaacagtgcggcag 186

                                                                       
Query: 198 aaagagtgggaactggttgatcaatgaacatatgaacatgacaatggttcataaattcgg 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaagagtgggaactggttgatcaatgaacatatgaacatgacaatggttcataaattcgg 126

                            
Query: 258 gcatgcatcaagttctg 274
           |||||||||||||||||
Sbjct: 125 gcatgcatcaagttctg 109


>gnl|LJGI|TC64382 similar to UniRef100_A7PI27 Cluster: Chromosome chr13 scaffold_17,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_17, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 883

 Score =  391 bits (197), Expect = e-108
 Identities = 197/197 (100%)
 Strand = Plus / Minus

                                                                       
Query: 78  tttctttgtttgcagagccaccaccagaacagagacatcactccttcaaaggaacactcc 137
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tttctttgtttgcagagccaccaccagaacagagacatcactccttcaaaggaacactcc 251

                                                                       
Query: 138 tccacaccggcgccattgtccccaccaaattaaaaacggattaactgaacagtgcggcag 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tccacaccggcgccattgtccccaccaaattaaaaacggattaactgaacagtgcggcag 191

                                                                       
Query: 198 aaagagtgggaactggttgatcaatgaacatatgaacatgacaatggttcataaattcgg 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aaagagtgggaactggttgatcaatgaacatatgaacatgacaatggttcataaattcgg 131

                            
Query: 258 gcatgcatcaagttctg 274
           |||||||||||||||||
Sbjct: 130 gcatgcatcaagttctg 114


>gnl|LJGI|AU089377 
          Length = 729

 Score =  379 bits (191), Expect = e-105
 Identities = 195/197 (98%)
 Strand = Plus / Minus

                                                                       
Query: 78  tttctttgtttgcagagccaccaccagaacagagacatcactccttcaaaggaacactcc 137
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 345 tttctttgtttgcagagccaccaccagaacagagacatcactccttcaaaggaacantcn 286

                                                                       
Query: 138 tccacaccggcgccattgtccccaccaaattaaaaacggattaactgaacagtgcggcag 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tccacaccggcgccattgtccccaccaaattaaaaacggattaactgaacagtgcggcag 226

                                                                       
Query: 198 aaagagtgggaactggttgatcaatgaacatatgaacatgacaatggttcataaattcgg 257
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 aaagagtgggaactggttgatcaatgaacatatgaacatgacaatggttcataaattcgg 166

                            
Query: 258 gcatgcatcaagttctg 274
           |||||||||||||||||
Sbjct: 165 gcatgcatcaagttctg 149


>gnl|LJGI|TC74621 similar to UniRef100_Q6GLA3 Cluster: Transformer-2 alpha; n=1;
           Xenopus tropicalis|Rep: Transformer-2 alpha - Xenopus
           tropicalis (Western clawed frog) (Silurana tropicalis),
           partial (8%)
          Length = 823

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 190 tgcggcagaaagagtgggaactggttgatcaatgaacatatgaacat 236
           |||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 713 tgcggcagaaagagtgggaactggttgatcaacgaacagatgaacat 667