Miyakogusa Predicted Gene
- Lj1g3v4093230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4093230.1 tr|A2Q6F5|A2Q6F5_MEDTR Homeodomain-related
OS=Medicago truncatula GN=MTR_7g089010 PE=4 SV=1,71.83,0,seg,NULL;
FAMILY NOT NAMED,NULL; myb_SHAQKYF: myb-like DNA-binding domain,
SHAQKYF ,Myb domain, plan,CUFF.31897.1
(921 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60543 homologue to UniRef100_A2Q6F5 Cluster: Homeodom... 333 1e-90
gnl|LJGI|FS325139 homologue to UniRef100_A2Q6F5 Cluster: Homeodo... 287 6e-77
>gnl|LJGI|TC60543 homologue to UniRef100_A2Q6F5 Cluster: Homeodomain-related; n=1;
Medicago truncatula|Rep: Homeodomain-related - Medicago
truncatula (Barrel medic), partial (31%)
Length = 771
Score = 333 bits (168), Expect = 1e-90
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 209 cgccgctttcttctaacccttcttctcttccttcatccgccgattttgctgattccggcg 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cgccgctttcttctaacccttcttctcttccttcatccgccgattttgctgattccggcg 663
Query: 269 agctgggctccggcaacggcggcgaggaaccggccagaactctcaagaggccgcgcctgg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 agctgggctccggcaacggcggcgaggaaccggccagaactctcaagaggccgcgcctgg 723
Query: 329 tttggaccccgcagctccacaagcggtttgttgacgccgtggcgcacc 376
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tttggaccccgcagctccacaagcggtttgttgacgccgtggcgcacc 771
Score = 283 bits (143), Expect = 9e-76
Identities = 143/143 (100%)
Strand = Plus / Plus
Query: 1 atgagggaagacgattcaaattggttcgttagatgggaagaagagcttccttcaccggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atgagggaagacgattcaaattggttcgttagatgggaagaagagcttccttcaccggag 455
Query: 61 gaactcatgccgttatcccaaaccctaatcacccctgatctagccatggcgtttgacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gaactcatgccgttatcccaaaccctaatcacccctgatctagccatggcgtttgacatc 515
Query: 121 agaaattctctcaccgccaccat 143
|||||||||||||||||||||||
Sbjct: 516 agaaattctctcaccgccaccat 538
>gnl|LJGI|FS325139 homologue to UniRef100_A2Q6F5 Cluster: Homeodomain-related; n=1;
Medicago truncatula|Rep: Homeodomain-related - Medicago
truncatula (Barrel medic), partial (31%)
Length = 726
Score = 287 bits (145), Expect = 6e-77
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 209 cgccgctttcttctaacccttcttctcttccttcatccgccgattttgctgattccggcg 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cgccgctttcttctaacccttcttctcttccttcatccgccgattttgctgattccggcg 641
Query: 269 agctgggctccggcaacggcggcgaggaaccggccagaactctcaagaggccgcgcctgg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 agctgggctccggcaacggcggcgaggaaccggccagaactctcaagaggccgcgcctgg 701
Query: 329 tttggaccccgcagctccacaagcg 353
|||||||||||||||||||||||||
Sbjct: 702 tttggaccccgcagctccacaagcg 726
Score = 283 bits (143), Expect = 9e-76
Identities = 143/143 (100%)
Strand = Plus / Plus
Query: 1 atgagggaagacgattcaaattggttcgttagatgggaagaagagcttccttcaccggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgagggaagacgattcaaattggttcgttagatgggaagaagagcttccttcaccggag 421
Query: 61 gaactcatgccgttatcccaaaccctaatcacccctgatctagccatggcgtttgacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaactcatgccgttatcccaaaccctaatcacccctgatctagccatggcgtttgacatc 481
Query: 121 agaaattctctcaccgccaccat 143
|||||||||||||||||||||||
Sbjct: 482 agaaattctctcaccgccaccat 504