Miyakogusa Predicted Gene
- Lj1g3v4083160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4083160.1 tr|A9S9W5|A9S9W5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_182654,34.01,9e-16,no description,Mog1/PsbP,
alpha/beta/alpha sandwich; PsbP,Photosystem II PsbP, oxygen evolving
compl,CUFF.31882.1
(765 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59144 homologue to UniRef100_A7PTC1 Cluster: Chromoso... 1516 0.0
gnl|LJGI|AV428734 similar to UniRef100_A7PTC1 Cluster: Chromosom... 389 e-107
>gnl|LJGI|TC59144 homologue to UniRef100_A7PTC1 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 1235
Score = 1516 bits (765), Expect = 0.0
Identities = 765/765 (100%)
Strand = Plus / Plus
Query: 1 atgtctacctctccattcacctcctttctcacactctcaacccagtcaccttcaaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atgtctacctctccattcacctcctttctcacactctcaacccagtcaccttcaaagctc 170
Query: 61 tcacctgttcgcacattcagagcctcagcttcttctgactcagttcctgcaacaagaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tcacctgttcgcacattcagagcctcagcttcttctgactcagttcctgcaacaagaagc 230
Query: 121 taccaactcataccacccagaagagaattcttgaagggtattgcgttgggggcacttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 taccaactcataccacccagaagagaattcttgaagggtattgcgttgggggcacttcca 290
Query: 181 cttgttctcctcagagaaacaccaccacctgcagaagctagagacgttgaagttggctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cttgttctcctcagagaaacaccaccacctgcagaagctagagacgttgaagttggctcc 350
Query: 241 ttcctcccaccttcaccagcagacccatctttcgttctcttcaaggcttctcctaaggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttcctcccaccttcaccagcagacccatctttcgttctcttcaaggcttctcctaaggac 410
Query: 301 acccctgcccttcgagcaggaaatgtgcagccataccagtttattctccccccaacttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 acccctgcccttcgagcaggaaatgtgcagccataccagtttattctccccccaacttgg 470
Query: 361 aaacagacacgaatagcaaacatattatctggaaattactgtcagccaaaatgtgctgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aaacagacacgaatagcaaacatattatctggaaattactgtcagccaaaatgtgctgag 530
Query: 421 ccttgggtggaggttaaatttgaagatgaaaaacaaggaaaagtccaggttgtggcttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ccttgggtggaggttaaatttgaagatgaaaaacaaggaaaagtccaggttgtggcttca 590
Query: 481 cctttgatacgcctaaccaacaaaccaaatgcaacaattgaggacattgggagcccagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cctttgatacgcctaaccaacaaaccaaatgcaacaattgaggacattgggagcccagac 650
Query: 541 aaagtgattgcatctcttgggccatttgtcaccggaagcacgtatgatccggatgagctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaagtgattgcatctcttgggccatttgtcaccggaagcacgtatgatccggatgagctt 710
Query: 601 attgagacttcagttgaaaagcttggtgatcagacgtactacaaatatgcgcttgaaact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 attgagacttcagttgaaaagcttggtgatcagacgtactacaaatatgcgcttgaaact 770
Query: 661 ccatatgctcttacgggttcacataatctagcaaaagcaacagcaaagggaaacactgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ccatatgctcttacgggttcacataatctagcaaaagcaacagcaaagggaaacactgtt 830
Query: 721 gttttgtttgtggctagtgccaatgacaagcagtggcaaacttct 765
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gttttgtttgtggctagtgccaatgacaagcagtggcaaacttct 875
>gnl|LJGI|AV428734 similar to UniRef100_A7PTC1 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 437
Score = 389 bits (196), Expect = e-107
Identities = 354/403 (87%), Gaps = 4/403 (0%)
Strand = Plus / Plus
Query: 1 atgtctacctctccattcacctcctttctcacactctcaacccagtcaccttcaaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atgtctacctctccattcacctcctttctcacactctcaacccagtcaccttcaaagctc 95
Query: 61 tcacctgttcgcacattcagagcctcagcttcttctgactcagttcctgcaacaagaagc 120
||||||||||||||||||| | || |||||||||||||||| |||||| || |||| |
Sbjct: 96 tcacctgttcgcacattcaaaaccctagcttcttctgactcaattcctggcaccagaaac 155
Query: 121 taccaactcataccacccagaagagaattcttgaagggtattgcgttgggggcacttcca 180
||||||||||||||||||| |||| |||||||| | || |||||||||||||||||| ||
Sbjct: 156 taccaactcataccacccaaaagaaaattcttggaagggattgcgttgggggcactttca 215
Query: 181 cttgttctcctcagagaaacaccaccacctgcagaagctagagacgttgaagtt-ggctc 239
|||| ||| || | | |||| |||||||||||||| || |||| ||||| || || ||
Sbjct: 216 cttggtcttcttaaaaaaaccacaccacctgcagaaacttaagaccttgaaattgggttc 275
Query: 240 cttcctcccaccttcaccagcagaccc--atctttcgttctcttcaaggcttctcctaag 297
||| ||||||||||||||| ||| || || ||| ||||||| ||||| | || ||||
Sbjct: 276 tttcttcccaccttcaccag-agaaccatatttttggttctctacaaggtctttcttaag 334
Query: 298 gacacccctgcccttcgagcaggaaatgtgcagccataccagtttattctccccccaact 357
||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 335 gacacccttgcccttagagcaggaaatgcgcagccataccagtttattctccccccatct 394
Query: 358 tggaaacagacacgaatagcaaacatattatctggaaattact 400
|||| |||||||||||| ||| |||||||||||||||||||||
Sbjct: 395 tggacacagacacgaatcgcacacatattatctggaaattact 437