Miyakogusa Predicted Gene
- Lj1g3v4082060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4082060.1 tr|I1JN11|I1JN11_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=1,85.07,0,Domain in
ubiquitin-specific proteases.,Peptidase C19, ubiquitin-specific
peptidase, DUSP domain; UC,CUFF.31881.1
(2772 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74727 similar to UniRef100_O22207 Cluster: Ubiquitin ... 959 0.0
gnl|LJGI|TC68248 similar to UniRef100_O22207 Cluster: Ubiquitin ... 759 0.0
gnl|LJGI|TC80958 similar to UniRef100_A7QYJ5 Cluster: Chromosome... 708 0.0
>gnl|LJGI|TC74727 similar to UniRef100_O22207 Cluster: Ubiquitin carboxyl-terminal
hydrolase 5; n=1; Arabidopsis thaliana|Rep: Ubiquitin
carboxyl-terminal hydrolase 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (17%)
Length = 631
Score = 959 bits (484), Expect = 0.0
Identities = 493/496 (99%)
Strand = Plus / Plus
Query: 1 atgacagaggtgtcgatgtgtagcagcagtacctctgagttgagtccagatgaggagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atgacagaggtgtcgatgtgtagcagcagtacctctgagttgagtccagatgaggagagg 195
Query: 61 atcatgatcagagacattgctcttgcttctcaagctaacagcaaagaaggcgacaccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atcatgatcagagacattgctcttgcttctcaagctaacagcaaagaaggcgacaccttc 255
Query: 121 tttttgatcacccagaggtggtggcaacattggattgaatatgtgaaccaagaccacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tttttgatcacccagaggtggtggcaacattggattgaatatgtgaaccaagaccacaca 315
Query: 181 aacacttcttatgatggatcttcctttttagaacaatgtgatatggcctattcgaatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aacacttcttatgatggatcttcctttttagaacaatgtgatatggcctattcgaatgtt 375
Query: 241 tcaaagaaaccgtctggtattgataattctgatttaatacatgatgttgcaccagaagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcaaagaaaccgtctggtattgataattctgatttaatacatgatgttgcaccagaagac 435
Query: 301 tctagtacaggtattgagattcatgatactcttttagaaggccgtgactatgtattactt 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 436 tctagtacaggtattgagattcatgatactcttttagagggccgtgactatgtattactt 495
Query: 361 ccccaagaagtttggaaccaattatttacgtggtatggtggtggacctacattgccaagg 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 496 ccccaagaagtttggaaccaattatttacgtggtatgggggtggacctacattgccaagg 555
Query: 421 aaagctatcagtttaggtctttcccagacagaattgactgtagaggtgtaccctttacgg 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 556 aaagctatcagtttaggtctttcccacacagaattgactgtagaggtgtaccctttacgg 615
Query: 481 cttcagttacttgtgt 496
||||||||||||||||
Sbjct: 616 cttcagttacttgtgt 631
>gnl|LJGI|TC68248 similar to UniRef100_O22207 Cluster: Ubiquitin carboxyl-terminal
hydrolase 5; n=1; Arabidopsis thaliana|Rep: Ubiquitin
carboxyl-terminal hydrolase 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (13%)
Length = 780
Score = 759 bits (383), Expect = 0.0
Identities = 392/395 (99%)
Strand = Plus / Plus
Query: 2378 gacggcaagcaagcaaaaagcttgatttatggaggctcccagaggttttggtcattcatt 2437
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 gacggcaagcaagcaaaaagcttgatttatggaggctcccagaggttttgttcattcatt 60
Query: 2438 taaagaggttctcatacagcaggtcaatgaagcacaagcttgagacatttgttaacttac 2497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaagaggttctcatacagcaggtcaatgaagcacaagcttgagacatttgttaacttac 120
Query: 2498 ccattcatgattttgacttaacaagttacatagccaacaaaaacaactctcgtccccaac 2557
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 121 ccattcatgattttgacttaacaagttacatagccaacgaaaacgactctcgtccccaac 180
Query: 2558 tgtatgaactgtatgccctcacaaatcattatggtacattgggtagtgggcattacactg 2617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtatgaactgtatgccctcacaaatcattatggtacattgggtagtgggcattacactg 240
Query: 2618 cacatatcaagcttttagatgaaaacaggtggtacaatttcgatgacacccatatatcag 2677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacatatcaagcttttagatgaaaacaggtggtacaatttcgatgacacccatatatcag 300
Query: 2678 ctataagtgaagatgaggttaacaccgctgctgcgtatgttttgttttaccggagggtga 2737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctataagtgaagatgaggttaacaccgctgctgcgtatgttttgttttaccggagggtga 360
Query: 2738 ggactgatgatgctgctgtaaacaatggggcttag 2772
|||||||||||||||||||||||||||||||||||
Sbjct: 361 ggactgatgatgctgctgtaaacaatggggcttag 395
>gnl|LJGI|TC80958 similar to UniRef100_A7QYJ5 Cluster: Chromosome undetermined
scaffold_248, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_248, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(15%)
Length = 394
Score = 708 bits (357), Expect = 0.0
Identities = 378/386 (97%), Gaps = 1/386 (0%)
Strand = Plus / Plus
Query: 1492 ctccagtccaccggcactaggaccatgacagcgacagtttttacatgtgatggaactgcc 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ctccagtccaccggcactaggaccatgacagcgacagtttttacatgtgatggaactgcc 68
Query: 1552 ctgccatctcctattacagtaactgtgtccaagcagggaagatgcagagatcttatccag 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ctgccatctcctattacagtaactgtgtccaagcagggaagatgcagagatcttatccag 128
Query: 1612 gcgcttagcaatgcttgctcattgaagcctaatgagaggctgttgctggtagagattcga 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gcgcttagcaatgcttgctcattgaagcctaatgagaggctgttgctggtagagattcga 188
Query: 1672 aaccatttgatccatagattttttgaagatcctcttcaattgttgtcctcaatcaaagat 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aaccatttgatccatagattttttgaagatcctcttcaattgttgtcctcaatcaaagat 248
Query: 1732 gatgaccgccttg-ctgtttacaagattccgaagatggnnnnnnntacaaagtatctcca 1790
||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 249 gatgaccgccttgcctgtttacaagattccgaagatggaaaaaaatacaaagtatctcca 308
Query: 1791 gttgatacatcgccgtagagagcagaatagtgactccctgaccatatctggatggaaacc 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gttgatacatcgccgtagagagcagaatagtgactccctgaccatatctggatggaaacc 368
Query: 1851 atatggaacacccattgtttcattga 1876
||||||||||||||||||||||||||
Sbjct: 369 atatggaacacccattgtttcattga 394