Miyakogusa Predicted Gene
- Lj1g3v4081820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4081820.1 Non Chatacterized Hit- tr|D8RR13|D8RR13_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.77,2e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.31853.1
(1551 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59958 weakly similar to UniRef100_A7PTE0 Cluster: Chr... 1065 0.0
gnl|LJGI|TC65321 similar to UniRef100_A7PTE0 Cluster: Chromosome... 955 0.0
gnl|LJGI|BP055670 212 5e-54
>gnl|LJGI|TC59958 weakly similar to UniRef100_A7PTE0 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 793
Score = 1065 bits (537), Expect = 0.0
Identities = 537/537 (100%)
Strand = Plus / Plus
Query: 1 atgggaaaagcagccgaagaagaacaccaaccgctgccacgtggcggaacctccaccgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atgggaaaagcagccgaagaagaacaccaaccgctgccacgtggcggaacctccaccgat 316
Query: 61 ccggcgctgaatgcggaggaagattgtcggtgccggtgttctcggattcggaagcttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccggcgctgaatgcggaggaagattgtcggtgccggtgttctcggattcggaagcttctc 376
Query: 121 agtgttagatgcatcctcgtgctgctgttctccgccgctctgttcctctctgctttgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agtgttagatgcatcctcgtgctgctgttctccgccgctctgttcctctctgctttgttt 436
Query: 181 tggttgcccccttttcttcgcctcgcagatcagaagcatctgcatgaaaattccagatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tggttgcccccttttcttcgcctcgcagatcagaagcatctgcatgaaaattccagatac 496
Query: 241 aaaggtcatgatattgtcgcaagctttattgttaataagtcagcctctttgctagaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aaaggtcatgatattgtcgcaagctttattgttaataagtcagcctctttgctagaagat 556
Query: 301 aacatcccgcaactcgcggatgaaatttttgatgagataggagctccctctaccaaagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aacatcccgcaactcgcggatgaaatttttgatgagataggagctccctctaccaaagtg 616
Query: 361 gtcatcttgtctctagatcctttacctgggccaaataagacaaaagtagtgtttgcagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtcatcttgtctctagatcctttacctgggccaaataagacaaaagtagtgtttgcagtt 676
Query: 421 gatcctgatgttggattatcagaaatggctcaagctgccattagtttgataaaatcatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gatcctgatgttggattatcagaaatggctcaagctgccattagtttgataaaatcatca 736
Query: 481 tttacatccatcattatacgtgactcacctttccagctcacttcttcatccatattc 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tttacatccatcattatacgtgactcacctttccagctcacttcttcatccatattc 793
>gnl|LJGI|TC65321 similar to UniRef100_A7PTE0 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 1293
Score = 955 bits (482), Expect = 0.0
Identities = 485/486 (99%)
Strand = Plus / Plus
Query: 1066 gatgcccatctagctccttctcctatgcctgcacctgcacctatacccggggagggtgca 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gatgcccatctagctccttctcctatgcctgcacctgcacctatacccggggagggtgca 445
Query: 1126 actccacctgaggttggtcctcctgttgcaccaaaaagtgtgcctgcaccaaagagaagt 1185
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 446 actccacctgaggttggtcctcctgttgcaccaaaaagtgtgcctgcaccgaagagaagt 505
Query: 1186 cctcaagcacagcctcctagttttcaatttgagcgtagaaaaaggtctagccataatgct 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cctcaagcacagcctcctagttttcaatttgagcgtagaaaaaggtctagccataatgct 565
Query: 1246 gggaagcatgctcatctagcaccttcaattgcccctactactcatcgacattatcatagt 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gggaagcatgctcatctagcaccttcaattgcccctactactcatcgacattatcatagt 625
Query: 1306 cctgttgcgtcaccaaaaccaccgtttgaacccccggcgcgtaactctcgtgcagtacct 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cctgttgcgtcaccaaaaccaccgtttgaacccccggcgcgtaactctcgtgcagtacct 685
Query: 1366 gccttgagtccgttaccaaatgtagcttttgctcatgctgagccccctcctaataatgaa 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gccttgagtccgttaccaaatgtagcttttgctcatgctgagccccctcctaataatgaa 745
Query: 1426 ccagctccagaacgtatgcggatgcattcacacggaccatcattatcgacatcctctgca 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ccagctccagaacgtatgcggatgcattcacacggaccatcattatcgacatcctctgca 805
Query: 1486 ggtagtcttggatctgtcaaatggacattcttaatgtttattgtacttgtgttacatgtg 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ggtagtcttggatctgtcaaatggacattcttaatgtttattgtacttgtgttacatgtg 865
Query: 1546 taacat 1551
||||||
Sbjct: 866 taacat 871
Score = 648 bits (327), Expect = 0.0
Identities = 330/331 (99%)
Strand = Plus / Plus
Query: 682 gatgagctcacaagtcagctaaagtctggattacatctggcatcctttgagaacttgtat 741
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gatgagctcacaagtcagttaaagtctggattacatctggcatcctttgagaacttgtat 61
Query: 742 atgagcttatccaattctgaaggttcaacagtagatgctcctactactgttcagtcatct 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atgagcttatccaattctgaaggttcaacagtagatgctcctactactgttcagtcatct 121
Query: 802 gttctacttgcaattggaattactccatcaaaacagaggctaaagcaactagcacaaacc 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gttctacttgcaattggaattactccatcaaaacagaggctaaagcaactagcacaaacc 181
Query: 862 atcatgggacctcataatcttggcttgaataacacggaatttggtagggttaagcaggtc 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atcatgggacctcataatcttggcttgaataacacggaatttggtagggttaagcaggtc 241
Query: 922 cgactttcatccatcttgcagcactccctgcatggcaatgatggtagtggctctgcatgg 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cgactttcatccatcttgcagcactccctgcatggcaatgatggtagtggctctgcatgg 301
Query: 982 tcaccttctccttctcctctgcctcatccat 1012
|||||||||||||||||||||||||||||||
Sbjct: 302 tcaccttctccttctcctctgcctcatccat 332
>gnl|LJGI|BP055670
Length = 424
Score = 212 bits (107), Expect = 5e-54
Identities = 153/167 (91%), Gaps = 1/167 (0%)
Strand = Plus / Minus
Query: 1385 atgtagcttttgctcatgctgagccccctcctaataatgaaccagctccagaacgtatgc 1444
|||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||
Sbjct: 424 atgtagcttttgctcatgctgagccccctccttataatgaacccgctcccgaacgtatgc 365
Query: 1445 ggatgcattcacacggaccatcattatcgacatcctctgcaggtagtcttggatctgtca 1504
|||||| ||| | ||| || || |||||||| |||||||| ||||||||||||||||||
Sbjct: 364 ggatgccttcccccggcccctccttatcgacctcctctgccggtagtcttggatctgtcc 305
Query: 1505 aatggaca-ttcttaatgtttattgtacttgtgttacatgtgtaaca 1550
|||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 304 aatggacacttcttaatgtttattgtacttgtgttacaagtgtaaca 258