Miyakogusa Predicted Gene
- Lj1g3v4080580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4080580.1 tr|A8J1X1|A8J1X1_CHLRE Peroxisomal membrane
MPV17/PMP22-like protein OS=Chlamydomonas reinhardtii
GN,53.26,4e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; PEROXISOMAL
MEMBRANE PROTEIN 2, PXMP2 (MPV17),Mpv17/PMP22,CUFF.31838.1
(624 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72906 similar to UniRef100_Q2HUU8 Cluster: WD-40 repe... 973 0.0
gnl|LJGI|BW607002 weakly similar to UniRef100_A7PTF2 Cluster: Ch... 708 0.0
gnl|LJGI|TC70277 similar to UniRef100_A7PTF2 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC72906 similar to UniRef100_Q2HUU8 Cluster: WD-40 repeat; n=1; Medicago
truncatula|Rep: WD-40 repeat - Medicago truncatula
(Barrel medic), partial (36%)
Length = 562
Score = 973 bits (491), Expect = 0.0
Identities = 491/491 (100%)
Strand = Plus / Plus
Query: 1 atggcgtatggagcatcagcatgcttcgcattcagccatggacccatttgccgtcaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atggcgtatggagcatcagcatgcttcgcattcagccatggacccatttgccgtcaaccc 124
Query: 61 atttccgaacccactcgccgccatcttcaattgcctaggtgctcttcgtcttcgctcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atttccgaacccactcgccgccatcttcaattgcctaggtgctcttcgtcttcgctcccc 184
Query: 121 ttcaacaacaacaaattctccaccctccccttcaaccgctctggacccgcctctttcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttcaacaacaacaaattctccaccctccccttcaaccgctctggacccgcctctttcacc 244
Query: 181 ggactacgcttccatgattctcgcctctctgccctctccaacgatggttcaggcggaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggactacgcttccatgattctcgcctctctgccctctccaacgatggttcaggcggaaca 304
Query: 241 ggtggtggctctggggactggtattctggcggcggtggtggcgacggcggtgctgatggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggtggtggctctggggactggtattctggcggcggtggtggcgacggcggtgctgatggc 364
Query: 301 ggagataagtggtccttcctttcatggtacttggctcttcttgcaaaacatcctgttcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggagataagtggtccttcctttcatggtacttggctcttcttgcaaaacatcctgttcta 424
Query: 361 gtaaaggctctaacatcggcgcttttgacactaattggagatttggtttgccagcttgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtaaaggctctaacatcggcgcttttgacactaattggagatttggtttgccagcttgtg 484
Query: 421 atagataaggtgcagtcaccggacttcaagagaacattcgtcttcagtctgcttggtttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atagataaggtgcagtcaccggacttcaagagaacattcgtcttcagtctgcttggtttt 544
Query: 481 gtgttggtggg 491
|||||||||||
Sbjct: 545 gtgttggtggg 555
>gnl|LJGI|BW607002 weakly similar to UniRef100_A7PTF2 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 487
Score = 708 bits (357), Expect = 0.0
Identities = 357/357 (100%)
Strand = Plus / Plus
Query: 1 atggcgtatggagcatcagcatgcttcgcattcagccatggacccatttgccgtcaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atggcgtatggagcatcagcatgcttcgcattcagccatggacccatttgccgtcaaccc 190
Query: 61 atttccgaacccactcgccgccatcttcaattgcctaggtgctcttcgtcttcgctcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atttccgaacccactcgccgccatcttcaattgcctaggtgctcttcgtcttcgctcccc 250
Query: 121 ttcaacaacaacaaattctccaccctccccttcaaccgctctggacccgcctctttcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttcaacaacaacaaattctccaccctccccttcaaccgctctggacccgcctctttcacc 310
Query: 181 ggactacgcttccatgattctcgcctctctgccctctccaacgatggttcaggcggaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggactacgcttccatgattctcgcctctctgccctctccaacgatggttcaggcggaaca 370
Query: 241 ggtggtggctctggggactggtattctggcggcggtggtggcgacggcggtgctgatggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ggtggtggctctggggactggtattctggcggcggtggtggcgacggcggtgctgatggc 430
Query: 301 ggagataagtggtccttcctttcatggtacttggctcttcttgcaaaacatcctgtt 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ggagataagtggtccttcctttcatggtacttggctcttcttgcaaaacatcctgtt 487
>gnl|LJGI|TC70277 similar to UniRef100_A7PTF2 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 544
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 544 ggagcttcaggtgcaattttgcggctt 570
|||||||||||||||||||||||||||
Sbjct: 1 ggagcttcaggtgcaattttgcggctt 27