Miyakogusa Predicted Gene
- Lj1g3v4080440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4080440.1 Non Chatacterized Hit- tr|C6TBC0|C6TBC0_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,77.54,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PORR,Plant
organelle RNA recognition domain,CUFF.31834.1
(1273 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322076 weakly similar to UniRef100_Q6K4X2 Cluster: Ty... 841 0.0
gnl|LJGI|FS348651 similar to UniRef100_A7PTH7 Cluster: Chromosom... 474 e-133
>gnl|LJGI|FS322076 weakly similar to UniRef100_Q6K4X2 Cluster: Tyrosine-specific
protein phosphatase-like; n=1; Oryza sativa Japonica
Group|Rep: Tyrosine-specific protein phosphatase-like -
Oryza sativa subsp. japonica (Rice), partial (11%)
Length = 690
Score = 841 bits (424), Expect = 0.0
Identities = 424/424 (100%)
Strand = Plus / Plus
Query: 1 atgaacctattatcaagtctcagatacaggatcttccaatccaccaccatctccttctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgaacctattatcaagtctcagatacaggatcttccaatccaccaccatctccttctca 326
Query: 61 cccttcatcctcttccaccaaagacgatggaagaaacccaccatttcagctcaaacccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cccttcatcctcttccaccaaagacgatggaagaaacccaccatttcagctcaaacccgt 386
Query: 121 ttggaagacagggtaagagacccccacctcgacaacttcatgacccacctcaaaaaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttggaagacagggtaagagacccccacctcgacaacttcatgacccacctcaaaaaactc 446
Query: 181 tacctcgtcctcggattccacaacctcatgtcgaatcgtaaacggggtccattcgtttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tacctcgtcctcggattccacaacctcatgtcgaatcgtaaacggggtccattcgtttcc 506
Query: 241 cttcagctcatgtctcgttggagaaacatcctcggactcaatgtcactgtcgggtccttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cttcagctcatgtctcgttggagaaacatcctcggactcaatgtcactgtcgggtccttc 566
Query: 301 ctccacaagtaccctcatgttttcgaggtgtttgcgcatccttttaggaggaacccgtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctccacaagtaccctcatgttttcgaggtgtttgcgcatccttttaggaggaacccgtgc 626
Query: 361 tgcagattcacgaggaagatgaaggagctgattctcctggaaagggttgttgtgaaggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgcagattcacgaggaagatgaaggagctgattctcctggaaagggttgttgtgaaggag 686
Query: 421 ctgg 424
||||
Sbjct: 687 ctgg 690
>gnl|LJGI|FS348651 similar to UniRef100_A7PTH7 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 660
Score = 474 bits (239), Expect = e-133
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 1035 ggaggcatatagcaaagggggtttggttgagcctaatcctgtgtatactgctcggaggaa 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ggaggcatatagcaaagggggtttggttgagcctaatcctgtgtatactgctcggaggaa 601
Query: 1095 tatgttggaccttatactattaggtcggaggaaaaccaaacaatttctagattgtgatag 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tatgttggaccttatactattaggtcggaggaaaaccaaacaatttctagattgtgatag 541
Query: 1155 taagtctaaggaagagagcaatgctgtagtatatgaattagatgatgagggagttcaaag 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 taagtctaaggaagagagcaatgctgtagtatatgaattagatgatgagggagttcaaag 481
Query: 1215 acaaggagattgggtgattccattcttggagagttgtgagcagaacagaaccccatgat 1273
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 acaaggagattgggtgattccattcttggagagttgtgagcagaacagaaccccatgat 422