Miyakogusa Predicted Gene
- Lj1g3v4079400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4079400.1 tr|G7L4S9|G7L4S9_MEDTR RING finger protein
OS=Medicago truncatula GN=MTR_7g088560 PE=4 SV=1,72.5,0.000006,Ring
finger,Zinc finger, RING-type; ZF_RING_2,Zinc finger, RING-type;
RING/U-box,NULL; INTEGRATOR CO,CUFF.31830.1
(918 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79461 weakly similar to UniRef100_A7PXY8 Cluster: Chr... 799 0.0
gnl|LJGI|BP068463 similar to UniRef100_Q2HUV1 Cluster: Zinc fing... 188 4e-47
>gnl|LJGI|TC79461 weakly similar to UniRef100_A7PXY8 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 487
Score = 799 bits (403), Expect = 0.0
Identities = 415/419 (99%)
Strand = Plus / Plus
Query: 1 atggaaccacagcagcagcaaccagagcagcgccacctcctcaccggcggaggcgattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atggaaccacagcagcagcaaccagagcagcgccacctcctcaccggcggaggcgattct 128
Query: 61 ccggcgctctgcggccccaccaccttcactttccccttcgccggcggtgagggctgcgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ccggcgctctgcggccccaccaccttcactttccccttcgccggcggtgagggctgcgcg 188
Query: 121 tattcaagggcggtacgggtggtggacatcgtgtggaacctggcgttcgtggtgcccgcc 180
|||||||||||||||| |||||||||||| | |||||||||||||||||||||| |||||
Sbjct: 189 tattcaagggcggtactggtggtggacatggagtggaacctggcgttcgtggtggccgcc 248
Query: 181 gccggcgtgctcctcttcacgctccacgagcggccttctactcccttgaggctgtggctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gccggcgtgctcctcttcacgctccacgagcggccttctactcccttgaggctgtggctc 308
Query: 241 tgtggctacgccttcgagtgtcttctccacatggctttcgtctactctgagtatcgctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgtggctacgccttcgagtgtcttctccacatggctttcgtctactctgagtatcgctcc 368
Query: 301 tccacggctcttgattccttctcccgcactccctacagtattttgaagaagttggaacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tccacggctcttgattccttctcccgcactccctacagtattttgaagaagttggaacct 428
Query: 361 atgaacactttgacatcgtccgtttggtgggtgtttggattttactggattgttgtggg 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atgaacactttgacatcgtccgtttggtgggtgtttggattttactggattgttgtggg 487
>gnl|LJGI|BP068463 similar to UniRef100_Q2HUV1 Cluster: Zinc finger, RING-type; RINGv;
n=1; Medicago truncatula|Rep: Zinc finger, RING-type;
RINGv - Medicago truncatula (Barrel medic), partial
(21%)
Length = 425
Score = 188 bits (95), Expect = 4e-47
Identities = 107/111 (96%)
Strand = Plus / Minus
Query: 808 ccctgtacccaccattttcatagtggatgcattagccgatggcttcggacgaaagcaacc 867
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccctgtacccaccattctcatagtggatgcattagccgatggcttcggacgaaagcaacc 366
Query: 868 tgccccctctgcaaatttaatctccttagagctgatacattggtttgaccc 918
||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgccccctcccccaatttaatctccttagagctgatacattggtttgaccc 315