Miyakogusa Predicted Gene

Lj1g3v4058790.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4058790.1 tr|G7L4R2|G7L4R2_MEDTR Palmitoyltransferase PFA4
OS=Medicago truncatula GN=MTR_7g088360 PE=4 SV=1,81.61,0,zf-DHHC,Zinc
finger, DHHC-type, palmitoyltransferase; ZF_DHHC,Zinc finger,
DHHC-type, palmitoyltrans,CUFF.31819.1
         (1266 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64835 similar to UniRef100_A7PTG5 Cluster: Chromosome...    76   6e-13
gnl|LJGI|TC80705 similar to UniRef100_A7P9Z1 Cluster: Chromosome...    56   6e-07

>gnl|LJGI|TC64835 similar to UniRef100_A7PTG5 Cluster: Chromosome chr8 scaffold_29,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_29, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (53%)
          Length = 1421

 Score = 75.8 bits (38), Expect = 6e-13
 Identities = 128/158 (81%)
 Strand = Plus / Plus

                                                                        
Query: 505  ttctgtgatacttgcttgctatatcgtccacctcgtgcttcccattgctctatctgcaat 564
            ||||||||||| |||||||| ||||| || |||||  |||| ||||| ||||| ||||| 
Sbjct: 922  ttctgtgatacatgcttgctgtatcgccctcctcggacttctcattgttctatatgcaac 981

                                                                        
Query: 565  aactgtgtgcagaagtttgatcatcattgcccttgggttggtcagtgtattggatcacgt 624
            |||||||| ||||  ||||||||||| || || ||||| || ||||| ||||||  ||| 
Sbjct: 982  aactgtgtccagagatttgatcatcactgtccctgggtcggccagtgcattggaatacga 1041

                                                  
Query: 625  aattatccattcttcataatgttcatatcaacatcaac 662
            || ||||  | |||| | ||||| || |||||||||||
Sbjct: 1042 aactatcggtacttcttcatgtttatttcaacatcaac 1079



 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                   
Query: 838  aaccagacaacttatgagaatttccgctaccgctatgataagaaggaaaacccat 892
            |||||||||||||| ||||||||| | ||||  |||||||||||||  |||||||
Sbjct: 1249 aaccagacaacttacgagaatttcagataccaatatgataagaagggcaacccat 1303


>gnl|LJGI|TC80705 similar to UniRef100_A7P9Z1 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (67%)
          Length = 1351

 Score = 56.0 bits (28), Expect = 6e-07
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 562 aataactgtgtgcagaagtttgatcatcattgcccttgggttggtcagtgtattgg 617
           |||||||||||  | | ||||||||| |||||||| |||||||||||||| |||||
Sbjct: 270 aataactgtgtagaaaggtttgatcaccattgcccgtgggttggtcagtgcattgg 325