Miyakogusa Predicted Gene
- Lj1g3v4047310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4047310.1 tr|G7JND0|G7JND0_MEDTR Inter-alpha-trypsin
inhibitor heavy chain H3 OS=Medicago truncatula GN=MTR_4g,77.04,0,no
description,Zinc finger, RING/FYVE/PHD-type; no description,NULL; ZINC
FINGER (C3HC4-TYPE RING FI,CUFF.31800.1
(2163 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78771 similar to UniRef100_A7NZL5 Cluster: Chromosome... 1021 0.0
gnl|LJGI|GO023427 similar to UniRef100_A7NZL5 Cluster: Chromosom... 155 1e-36
gnl|LJGI|AV407180 similar to UniRef100_A7PI33 Cluster: Chromosom... 107 3e-22
gnl|LJGI|GO026249 similar to UniRef100_A7NZL5 Cluster: Chromosom... 64 4e-09
>gnl|LJGI|TC78771 similar to UniRef100_A7NZL5 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 1035
Score = 1021 bits (515), Expect = 0.0
Identities = 518/519 (99%)
Strand = Plus / Plus
Query: 1645 gtggctctggaagaaactagtgaagtaaaaattcagagacctgacgtcggtagtgagtta 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggctctggaagaaactagtgaagtaaaaattcagagacctgacgtcggtagtgagtta 60
Query: 1705 gttgggtcgatagaagttgacagacagcgaaaccggcttcaagcagctgaggcaatggca 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgggtcgatagaagttgacagacagcgaaaccggcttcaagcagctgaggcaatggca 120
Query: 1765 gaggctagagttgcggccgaacgcggggatttgtccactgcagtttctatcctagatcgc 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggctagagttgcggccgaacgcggggatttgtccactgcagtttctatcctagatcgc 180
Query: 1825 tgccaaaaggcgttgtctgaaactgtttctgcccaagccggggatcggttatgtgttgcg 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgccaaaaggcgttgtctgaaactgtttctgcccaagccggggatcggttatgtgttgcg 240
Query: 1885 ctttcggctgaattaaaggagatgcaagagaggatggcgacccaacaagtctatgagcag 1944
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 241 ctttcggctgaattaaaggagatgcaagagaggatggcgacccaacaggtctatgagcag 300
Query: 1945 tctggaagggcttatgttttgtcaggaatgagttcacatgcatggcaaagggcaacagcg 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctggaagggcttatgttttgtcaggaatgagttcacatgcatggcaaagggcaacagcg 360
Query: 2005 aggggtgattctaccgacagcaccagcgttatgcaatcataccaaaccccttctatggtt 2064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggggtgattctaccgacagcaccagcgttatgcaatcataccaaaccccttctatggtt 420
Query: 2065 gatatggttatgcgatctcaaaccatggttttcggagctcctcaaggtagacgcgttctc 2124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatatggttatgcgatctcaaaccatggttttcggagctcctcaaggtagacgcgttctc 480
Query: 2125 cagcctactaaatcatttcctgagaggcagagaagataa 2163
|||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagcctactaaatcatttcctgagaggcagagaagataa 519
>gnl|LJGI|GO023427 similar to UniRef100_A7NZL5 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 271
Score = 155 bits (78), Expect = 1e-36
Identities = 170/198 (85%), Gaps = 2/198 (1%)
Strand = Plus / Plus
Query: 1183 gattaccagtcacttgtcccaaactccattcatcacaataatggtacagggt-tgcatat 1241
||||||| ||| ||||| |||| ||||||||||| | |||| || ||||| |||||||
Sbjct: 49 gattaccggtctcttgtgccaagctccattcatcgtagtaattgtg-agggtatgcatat 107
Query: 1242 accggtgcatgcttttggctttggcactgatcatgatgctacttcaatgcattctatctc 1301
||| || ||||||||||| ||||| |||| |||||||||||| |||||||||| |||||
Sbjct: 108 accagttcatgcttttggatttggtgctgaccatgatgctactgcaatgcattcaatctc 167
Query: 1302 tgagatatccgggggtacattttcttttattgaagctgaggatgtgattcaggatgcatt 1361
|||||| | ||||| || || |||||||||||| |||||||| ||||||||||||||||
Sbjct: 168 tgagattactgggggcacgttctcttttattgaaactgaggatatgattcaggatgcatt 227
Query: 1362 tgcacagtgtattggggg 1379
|||||||||| |||||||
Sbjct: 228 tgcacagtgtcttggggg 245
>gnl|LJGI|AV407180 similar to UniRef100_A7PI33 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 365
Score = 107 bits (54), Expect = 3e-22
Identities = 156/190 (82%)
Strand = Plus / Plus
Query: 818 ttgaccttgttacagttcttgatgtaagtggtagcatgggaggtactaagcttgcattgc 877
||||||| || ||||||||||| |||||||| ||||||| |||||| ||| ||||||| |
Sbjct: 143 ttgacctcgtgacagttcttgacgtaagtgggagcatggcaggtacaaagattgcattac 202
Query: 878 taaaacgagctatgggttttgtcattcaaaatctgggtccatcggatcggttgtctgtca 937
|||||||||||||||| |||||||| || ||||| || |||| || ||| | |||||
Sbjct: 203 taaaacgagctatgggatttgtcatacagaatctaagttcatcagaccggctttctgttg 262
Query: 938 ttgccttctcttccacagcgcgccgtatctttcctcttcggctgatgactgacattggaa 997
||||||| || ||||||| ||||| ||| ||||| |||| ||||||||| | |||
Sbjct: 263 ttgccttttccaccacagcccgccgcatcagccctctacggcagatgactgagaccggac 322
Query: 998 ggcagcaggc 1007
||||||||||
Sbjct: 323 ggcagcaggc 332
>gnl|LJGI|GO026249 similar to UniRef100_A7NZL5 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (11%)
Length = 275
Score = 63.9 bits (32), Expect = 4e-09
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 1838 tgtctgaaactgtttctgcccaagccggggatcggttatgtgttgcgctttcggctgaat 1897
|||||||||||||||| |||| ||| || ||| | ||||||||| | | || ||||||
Sbjct: 64 tgtctgaaactgtttcggcccgagctggtgatagcttatgtgtttctttgtctgctgaac 123
Query: 1898 taaaggagatgcaagagaggatgg 1921
| ||||||||||||||||||||||
Sbjct: 124 tgaaggagatgcaagagaggatgg 147