Miyakogusa Predicted Gene

Lj1g3v4027090.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4027090.2 Non Chatacterized Hit- tr|A9P0B1|A9P0B1_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,60.24,6e-19,seg,NULL,CUFF.31781.2
         (681 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80776                                                      797   0.0  
gnl|LJGI|FS354260 similar to UniRef100_A7Q9Y7 Cluster: Chromosom...   492   e-138

>gnl|LJGI|TC80776 
          Length = 792

 Score =  797 bits (402), Expect = 0.0
 Identities = 405/406 (99%)
 Strand = Plus / Plus

                                                                       
Query: 22  gtgctggtgtgccttcggtggcttatcagaaaattcgtttatcaaaacttgactggtgat 81
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtgctggtgtgccttcggtggcttatcagaaaattcgtttatcaaaacttgactggtgat 329

                                                                       
Query: 82  gaacttgtgaagctgtttcctcctgatcttccacttcacctgcaaaccattctcttgctt 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gaacttgtgaagctgtttcctcctgatcttccacttcacctgcaaaccattctcttgctt 389

                                                                       
Query: 142 tgcttccagaaaaatggacagtgctggagggatgatgtctctgcacaacaggatttgtta 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgcttccagaaaaatggacagtgctggagggatgatgtctctgcacaacaggatttgtta 449

                                                                       
Query: 202 ccagcgacaggggtttccagtgaggtcagaacagatattgcgccatctttaccttcactg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ccagcgacaggggtttccagtgaggtcagaacagatattgcgccatctttaccttcactg 509

                                                                       
Query: 262 ccatctccagtgatgtcaacacctctctggccacgccaagaccctgattctcttgcccag 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ccatctccagtgatgtcaacacctctctggccacgccaagaccctgattctcttgcccag 569

                                                                       
Query: 322 atgaatcaaagtgattttggaatatcaacaccgcttgttgctgattgtaatgtgtcaggg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 atgaatcaaagtgattttggaatatcaacaccgcttgttgctgattgtaatgtgtcaggg 629

                                                         
Query: 382 ctgcctgcatgcttccagtgtgatgttgctccttttgagaactcgg 427
           ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ctgtctgcatgcttccagtgtgatgttgctccttttgagaactcgg 675


>gnl|LJGI|FS354260 similar to UniRef100_A7Q9Y7 Cluster: Chromosome chr8 scaffold_68,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_68, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 766

 Score =  492 bits (248), Expect = e-138
 Identities = 254/256 (99%)
 Strand = Plus / Minus

                                                                       
Query: 426 ggaaaaccttccttttctcaaatcaatgacttggaccatggagaatcgcggctcatcccc 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggaaaaccttccttttctcaaatcaatgacttggaccatggagaatcgcggctcatcccc 403

                                                                       
Query: 486 tgcagatagagtggctattatcactcttaagctgcatgatcgtagcaagtcttcattagg 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgcagatagagtggctattatcactcttaagctgcatgatcgtagcaagtcttcattagg 343

                                                                       
Query: 546 cgaaaaagaggttaagtttcagattacaagggatactcttgaggccatgctgacatccat 605
           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 342 cgaaacagaggttaagtttcagattacaagggatactcttggggccatgctgacatccat 283

                                                                       
Query: 606 gacatacatcagtgaacaactaagtgctgttgggacttcttctgggccagccaacaagaa 665
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gacatacatcagtgaacaactaagtgctgttgggacttcttctgggccagccaacaagaa 223

                           
Query: 666 acaaaagcagtagttt 681
           ||||||||||||||||
Sbjct: 222 acaaaagcagtagttt 207