Miyakogusa Predicted Gene
- Lj1g3v4012770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4012770.1 Non Chatacterized Hit- tr|D8QX07|D8QX07_SELML
Putative uncharacterized protein OS=Selaginella
moelle,25.93,3e-18,zf-RanBP,Zinc finger, RanBP2-type; no
description,NULL; seg,NULL; ZF_RANBP2_2,Zinc finger,
RanBP2-ty,CUFF.31766.1
(2451 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO022633 similar to UniRef100_A7QA20 Cluster: Chromosom... 1324 0.0
gnl|LJGI|AV779188 similar to UniRef100_A9WDS4 Cluster: Conserved... 599 e-170
gnl|LJGI|BP043451 homologue to UniRef100_A7QA20 Cluster: Chromos... 357 2e-97
gnl|LJGI|BW599626 similar to UniRef100_A7QA20 Cluster: Chromosom... 147 4e-34
>gnl|LJGI|GO022633 similar to UniRef100_A7QA20 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 676
Score = 1324 bits (668), Expect = 0.0
Identities = 674/676 (99%)
Strand = Plus / Plus
Query: 846 ggaagctagaccaaaaagacaactaactggaggagaatgggaatgtcctcagtgtgattt 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaagctagaccaaaaagacaactaactggaggagaatgggaatgtcctcagtgtgattt 60
Query: 906 ctgtaactacgggaggaacgtgacttgcttaaggtgtgactgcaagcggcctggccaaat 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtaactacgggaggaacgtgacttgcttaaggtgtgactgcaagcggcctggccaaat 120
Query: 966 atcgttgggtgccaccaatcccgtatcacatgtggggtatggaaatggaaacaattctga 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcgttgggtgccaccaatcccgtatcacatgtggggtatggaaatggaaacaattctga 180
Query: 1026 tatgtcagatgttgatgctaggttagctgctaatgaagagaaggcgcagcgttggtttaa 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatgtcagatgttgatgctaggttagctgctaatgaagagaaggcgcagcgttggtttaa 240
Query: 1086 caaggtttctcaactagacagtaatgctgatattaacagtgtgatggcagatgaggattt 1145
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaggtttctcaactagacaataatgctgatattaacagtgtgatggcagatgaggattt 300
Query: 1146 tccggaaataatgccgttaaggaaaggagttaacagatttgttgtgagcacaaggaaaac 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccggaaataatgccgttaaggaaaggagttaacagatttgttgtgagcacaaggaaaac 360
Query: 1206 tccattggagaggaggttgggcaatgctcaatacaagagtaacttgggagataatgacat 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccattggagaggaggttgggcaatgctcaatacaagagtaacttgggagataatgacat 420
Query: 1266 tcccggggttgaggattttaaagctggccttccccaatccgacaagaaaaacattggtgc 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcccggggttgaggattttaaagctggccttccccaatccgacaagaaaaacattggtgc 480
Query: 1326 agaacaagataccagtagatacggcccaccttcaattgctagcaatgcttcaaatttcaa 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agaacaagataccagtagatacggcccaccttcaattgctagcaatgcttcaaatttcaa 540
Query: 1386 agatgtgaaagggagcaacagtagttccatgcctccctttccattttcttcagatgcgct 1445
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaatgtgaaagggagcaacagtagttccatgcctccctttccattttcttcagatgcgct 600
Query: 1446 tccccaaaagtctgagaacttgcgagcagaggatagaaaaaccgcgccattgggcgccaa 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tccccaaaagtctgagaacttgcgagcagaggatagaaaaaccgcgccattgggcgccaa 660
Query: 1506 tgttggatatgtcagt 1521
||||||||||||||||
Sbjct: 661 tgttggatatgtcagt 676
>gnl|LJGI|AV779188 similar to UniRef100_A9WDS4 Cluster: Conserved repeat domain
protein; n=1; Chloroflexus aurantiacus J-10-fl|Rep:
Conserved repeat domain protein - Chloroflexus
aurantiacus J-10-fl, partial (3%)
Length = 364
Score = 599 bits (302), Expect = e-170
Identities = 317/322 (98%)
Strand = Plus / Plus
Query: 162 caaactcaaacccaaagcttcccagcaccaacaacaacaaagccaccttcacacccaacc 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 caaactcaaacccaaagcttcccagcaccaacaacaacaaagccaccttcacacccaacc 102
Query: 222 tccctcctccctcaccacccacccatggcccgaatgctccagatttctctcccacatctc 281
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 103 tccctcctccctcaccacccacccatggcccgaatgctccagatttctgtcccacatctc 162
Query: 282 ctccgtcggctacgctaccaccgctcccgaaaccggcttcccggcgaccggggagttgtc 341
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 163 ctccgtcggctacgctaccaccgctcccgaaaccggcttcccggcgagcggggagtagtc 222
Query: 342 gcagcgcgaggtcagtgcctgcttggcgttcgcccgcgaccgaccgaaccttctccggtt 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gcagcgcgaggtcagtgcctgcttggcgttcgcccgcgaccgaccgaaccttctccggtt 282
Query: 402 gctttcgatgagagatattgcggttgtggttgaacatggcactccctttctgtttccaga 461
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 283 gctttcgatgagagatatggcggttgtggttgaacatggcactccctttctgtatccaga 342
Query: 462 tgctgaggattccatgaggaag 483
||||||||||||||||||||||
Sbjct: 343 tgctgaggattccatgaggaag 364
>gnl|LJGI|BP043451 homologue to UniRef100_A7QA20 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 544
Score = 357 bits (180), Expect = 2e-97
Identities = 180/180 (100%)
Strand = Plus / Minus
Query: 2272 ttggaggggtcggccgtgaaggaaccggatcctttggacatgtcagaggaggcaaaggcg 2331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ttggaggggtcggccgtgaaggaaccggatcctttggacatgtcagaggaggcaaaggcg 485
Query: 2332 gagaggtggttccgtcgtgtctcgcagattaaggatatatctgagctcagtcagattcca 2391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gagaggtggttccgtcgtgtctcgcagattaaggatatatctgagctcagtcagattcca 425
Query: 2392 gatgaagattttccttcaataatgcctatgcggaaaggggtgaatagatttgttgtgagc 2451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gatgaagattttccttcaataatgcctatgcggaaaggggtgaatagatttgttgtgagc 365
Score = 56.0 bits (28), Expect = 1e-06
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 1133 cagatgaggattttccggaaataatgccgttaaggaaaggagttaacagatttgttgtga 1192
||||||| |||||||| ||||||||| | ||||||| || || |||||||||||||
Sbjct: 426 cagatgaagattttccttcaataatgcctatgcggaaaggggtgaatagatttgttgtga 367
Query: 1193 gcacaaggaaaactccattggagaggaggttg 1224
||| |||||||| |||||||| || ||||||
Sbjct: 366 gcaagaggaaaacaccattggaaagaaggttg 335
>gnl|LJGI|BW599626 similar to UniRef100_A7QA20 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 473
Score = 147 bits (74), Expect = 4e-34
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 2296 ccggatcctttggacatgtcagaggaggcaaaggcggagaggtggttccgtcgtgtctcg 2355
||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||
Sbjct: 376 ccggatcctttggacatgtcagacgaagcaaaggcggagaggtggttccgtctcgtctcg 435
Query: 2356 cagattaaggatatatctgagctcagtcagattccaga 2393
|||||||||||||| ||||||| |||||||||||||||
Sbjct: 436 cagattaaggatatgtctgagcacagtcagattccaga 473