Miyakogusa Predicted Gene

Lj1g3v3992540.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3992540.1 tr|Q2A0L6|Q2A0L6_MAIZE WOX9B protein (Fragment)
OS=Zea mays GN=wox9B PE=2 SV=1,71.67,1e-18,seg,NULL;
Homeobox,Homeodomain; HOMEOBOX_2,Homeodomain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,N,CUFF.31747.1
         (849 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP035388 homologue to UniRef100_A2Q4C9 Cluster: Homeodo...  1094   0.0  
gnl|LJGI|BW613271 homologue to UniRef100_A2XG77 Cluster: WUSCHEL...   206   2e-52

>gnl|LJGI|BP035388 homologue to UniRef100_A2Q4C9 Cluster: Homeodomain-related; n=1;
           Medicago truncatula|Rep: Homeodomain-related - Medicago
           truncatula (Barrel medic), partial (27%)
          Length = 557

 Score = 1094 bits (552), Expect = 0.0
 Identities = 554/555 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagatcatcaggggcagaaggaccccaacaccaaaaacaacaacgctccaagcccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   atggaagatcatcaggggcagaaggaccccaacaccaaaaacaacaacgctccaagcccc 62

                                                                       
Query: 61  caccatggctgcagctccgagaagagtgaaccggttaggtcaaggtggactccaaagcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  caccatggctgcagctccgagaagagtgaaccggttaggtcaaggtggactccaaagcca 122

                                                                       
Query: 121 gaacaaatcctcatccttgagtccatcttcaacagcggcatggtgaacccaccaaaagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gaacaaatcctcatccttgagtccatcttcaacagcggcatggtgaacccaccaaaagat 182

                                                                       
Query: 181 gaaaccgtcagaataaggaagctccttgagaaattcggcaccgtcggtgacgccaacgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gaaaccgtcagaataaggaagctccttgagaaattcggcaccgtcggtgacgccaacgtg 242

                                                                       
Query: 241 ttttactggttccagaaccgccgctcccgatctcgccgccgccagcgccagatgcaagcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttttactggttccagaaccgccgctcccgatctcgccgccgccagcgccagatgcaagcc 302

                                                                       
Query: 301 tcccttgttgagcagagaaacaacctgcagaacaacaacatgcagcagcagcttcttgaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tcccttgttgagcagagaaacaacctgcagaacaacaacatgcagcagcagcttcttgaa 362

                                                                       
Query: 361 ggtgcaccagctgcagcaagtgctattccttgtgatcaagctcagggtcatcccaacctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ggtgcaccagctgcagcaagtgctattccttgtgatcaagctcagggtcatcccaacctt 422

                                                                       
Query: 421 gctgctgcaatttccatgggttttggttcttcctcttctccatcttatcttgctggttcc 480
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 423 gctgctgcaatttccatgggtttnggttcttcctcttctccatcttatcttgctggttcc 482

                                                                       
Query: 481 tcttcatcttgtggtgttggccaacaaggcttggatggttacttctcactttctcctcaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcttcatcttgtggtgttggccaacaaggcttggatggttacttctcactttctcctcaa 542

                          
Query: 541 atgggttacccggga 555
           |||||||||||||||
Sbjct: 543 atgggttacccggga 557


>gnl|LJGI|BW613271 homologue to UniRef100_A2XG77 Cluster: WUSCHEL-related homeobox 6;
           n=1; Oryza sativa Indica Group|Rep: WUSCHEL-related
           homeobox 6 - Oryza sativa subsp. indica (Rice), partial
           (22%)
          Length = 460

 Score =  206 bits (104), Expect = 2e-52
 Identities = 176/200 (88%)
 Strand = Plus / Plus

                                                                       
Query: 97  aggtcaaggtggactccaaagccagaacaaatcctcatccttgagtccatcttcaacagc 156
           |||||| ||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 165 aggtcacggtggacgcctaagccagaacaaatcctcatacttgagtccatcttcaacagc 224

                                                                       
Query: 157 ggcatggtgaacccaccaaaagatgaaaccgtcagaataaggaagctccttgagaaattc 216
           |||||||| ||||| ||||| || || ||  ||| |||||| ||||| ||||||||||||
Sbjct: 225 ggcatggtaaacccgccaaaggaagagactttcataataagaaagcttcttgagaaattc 284

                                                                       
Query: 217 ggcaccgtcggtgacgccaacgtgttttactggttccagaaccgccgctcccgatctcgc 276
           |||||||| || || || |||||||| ||||||||||||||||||||||| || || || 
Sbjct: 285 ggcaccgttggcgatgctaacgtgttctactggttccagaaccgccgctctcgctcccgt 344

                               
Query: 277 cgccgccagcgccagatgca 296
           |||||||| |||||||||||
Sbjct: 345 cgccgccaacgccagatgca 364