Miyakogusa Predicted Gene
- Lj1g3v3980440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3980440.1 tr|G7L1K1|G7L1K1_MEDTR Cation/calcium exchanger
OS=Medicago truncatula GN=MTR_7g086690 PE=4 SV=1,73.32,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; NA+/CA2+ K+ INDEPENDENT EXCHANGER,NULL;
Na_Ca_ex,Sodium/calcium ,CUFF.31737.1
(1794 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81101 weakly similar to UniRef100_Q8W102 Cluster: AT5... 888 0.0
gnl|LJGI|AV408146 similar to UniRef100_A7PG90 Cluster: Chromosom... 842 0.0
gnl|LJGI|TC69652 weakly similar to UniRef100_A7PG90 Cluster: Chr... 821 0.0
gnl|LJGI|BU494124 similar to UniRef100_A7PG90 Cluster: Chromosom... 172 5e-42
gnl|LJGI|FS358030 homologue to UniRef100_A6X6N1 Cluster: Flagell... 119 6e-26
gnl|LJGI|TC77211 weakly similar to UniRef100_A7QRH9 Cluster: Chr... 119 6e-26
>gnl|LJGI|TC81101 weakly similar to UniRef100_Q8W102 Cluster: AT5g17860/MVA3_210;
n=1; Arabidopsis thaliana|Rep: AT5g17860/MVA3_210 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 891
Score = 888 bits (448), Expect = 0.0
Identities = 448/448 (100%)
Strand = Plus / Plus
Query: 1 atgtctacaactaccacaactactacaactacaaccacagtttctctttccaaaagaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgtctacaactaccacaactactacaactacaaccacagtttctctttccaaaagaatg 503
Query: 61 ggtggtttcagtttcacagtgttcttcaacacctcgtttgtctttttgttgtgtgtttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggtggtttcagtttcacagtgttcttcaacacctcgtttgtctttttgttgtgtgtttgt 563
Query: 121 tttatagttcatttcaagtactcttcagaacatgctgttttgaagagcaacaacaacaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttatagttcatttcaagtactcttcagaacatgctgttttgaagagcaacaacaacaac 623
Query: 181 cggtttggttttggtgttgaacaatcttgtaagagcttcctgagcctgagttatgaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cggtttggttttggtgttgaacaatcttgtaagagcttcctgagcctgagttatgaagct 683
Query: 241 aagtgcttgtacatgaaatccaacaacaataatccatgtgtttctcagggctatgttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagtgcttgtacatgaaatccaacaacaataatccatgtgtttctcagggctatgttgat 743
Query: 301 tacctttaccttttctattgcaaatttggggggtttcctatattgggtcattttctgttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tacctttaccttttctattgcaaatttggggggtttcctatattgggtcattttctgttg 803
Query: 361 ttgctctggctattggttctgttttatctgctggcaaacactgcttctgattatttttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttgctctggctattggttctgttttatctgctggcaaacactgcttctgattatttttgt 863
Query: 421 ccttcccttgaacatttgtctaagttgc 448
||||||||||||||||||||||||||||
Sbjct: 864 ccttcccttgaacatttgtctaagttgc 891
>gnl|LJGI|AV408146 similar to UniRef100_A7PG90 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 429
Score = 842 bits (425), Expect = 0.0
Identities = 428/429 (99%)
Strand = Plus / Plus
Query: 691 ctcttggttcttctaggcttgttcaccattttgatcactggggaggtcaatgttgttggg 750
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcttggttcttctaggctcgttcaccattttgatcactggggaggtcaatgttgttggg 60
Query: 751 gcaattggtttctgcttgttgtatgtggtctatgtgatagttgtttatgtctcatcttcc 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaattggtttctgcttgttgtatgtggtctatgtgatagttgtttatgtctcatcttcc 120
Query: 811 ccaaggaaaggtgtctgtggggatgctgaaactgaaagtgatgacaattcaagtaatggc 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaaggaaaggtgtctgtggggatgctgaaactgaaagtgatgacaattcaagtaatggc 180
Query: 871 aacaatttaagtgctcctctgctcagtgggatggagaaaggactaattgattctgatgca 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacaatttaagtgctcctctgctcagtgggatggagaaaggactaattgattctgatgca 240
Query: 931 aatggagctcaggaatgttgcttgaaaattgagaacaaatgctgctgtgtgaaatcttca 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatggagctcaggaatgttgcttgaaaattgagaacaaatgctgctgtgtgaaatcttca 300
Query: 991 atatgtagaaggttactttttgtcttggagatgcccctttacttgcctaggagattgaca 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atatgtagaaggttactttttgtcttggagatgcccctttacttgcctaggagattgaca 360
Query: 1051 atacctgttgtatgtgaagagaggtggtccaaaccctatgcagtttcttcagctatacta 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atacctgttgtatgtgaagagaggtggtccaaaccctatgcagtttcttcagctatacta 420
Query: 1111 gcaccactt 1119
|||||||||
Sbjct: 421 gcaccactt 429
>gnl|LJGI|TC69652 weakly similar to UniRef100_A7PG90 Cluster: Chromosome chr6
scaffold_15, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_15, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 781
Score = 821 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 1381 agtccttcaatattggggttaacagttcttgcttggggaaattcacttggggatttggtg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtccttcaatattggggttaacagttcttgcttggggaaattcacttggggatttggtg 60
Query: 1441 actaatttgacaatggctttgaagggtggtccagaaggtgctcaaatagcaatatcaggt 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actaatttgacaatggctttgaagggtggtccagaaggtgctcaaatagcaatatcaggt 120
Query: 1501 tgttatgctggccctatcttcaatatagtggttgggttgggcttatctcttgtgagctct 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgttatgctggccctatcttcaatatagtggttgggttgggcttatctcttgtgagctct 180
Query: 1561 tcttggtctgaatacccttcatctgttgtgatccctagagatccttacctgtgggagaca 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcttggtctgaatacccttcatctgttgtgatccctagagatccttacctgtgggagaca 240
Query: 1621 ttggcacttttggtggctggattggtttgggcacttgtggttctgattaggagggatatg 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggcacttttggtggctggattggtttgggcacttgtggttctgattaggagggatatg 300
Query: 1681 aagcttgatgcagtccttggaggagggcttctagttgtttacttcatttctctgtttcta 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagcttgatgcagtccttggaggagggcttctagttgtttacttcatttctctgtttcta 360
Query: 1741 aggctggttcagacacttggatctctccaatttcaggatatgttagtcttatag 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggctggttcagacacttggatctctccaatttcaggatatgttagtcttatag 414
>gnl|LJGI|BU494124 similar to UniRef100_A7PG90 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 292
Score = 172 bits (87), Expect = 5e-42
Identities = 239/287 (83%), Gaps = 2/287 (0%)
Strand = Plus / Plus
Query: 1375 ggaataagtccttcaatattggggttaacagttcttgcttggggaaattcacttggggat 1434
||||| |||||||||||| | ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 7 ggaattagtccttcaatactagggttaacagttcttgcctgggggaattcacttggggat 66
Query: 1435 ttggtgactaatttgacaatggctttgaagggtggtccagaaggtgctcaaatagcaata 1494
||| |||| ||||| || |||||| | || || || | ||| ||||||||||||||||||
Sbjct: 67 ttgctgacaaatttaaccatggctctaaatggaggacaagagggtgctcaaatagcaata 126
Query: 1495 tcaggttgttatgctggccctatcttcaatatagtggttgggttgggcttatctcttgtg 1554
|||||||| |||||||| || |||||||||| || |||||||| ||||| |||||||||
Sbjct: 127 tcaggttgctatgctggtccaatcttcaatactgttgttgggttaggcttgtctcttgtg 186
Query: 1555 agct-cttcttggtctgaatacccttcatctgttgtgatccctagagatccttacctgtg 1613
||| | | ||||| | ||||| ||||||| ||||||||| |||||| | || ||
Sbjct: 187 -gctgcaacatggtcacagtacccacaatctgttctgatccctaaagatccatttctttg 245
Query: 1614 ggagacattggcacttttggtggctggattggtttgggcacttgtgg 1660
|||||| |||| ||||||| | ||||||||||||||| |||||||
Sbjct: 246 ggagactttggtgtttttggttgttggattggtttgggctcttgtgg 292
>gnl|LJGI|FS358030 homologue to UniRef100_A6X6N1 Cluster: Flagellar biosynthetic protein
FliR; n=1; Ochrobactrum anthropi ATCC 49188|Rep:
Flagellar biosynthetic protein FliR - Ochrobactrum
anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168),
partial (5%)
Length = 430
Score = 119 bits (60), Expect = 6e-26
Identities = 108/124 (87%)
Strand = Plus / Minus
Query: 1628 ttttggtggctggattggtttgggcacttgtggttctgattaggagggatatgaagcttg 1687
||||||| | ||||||||||||||| ||||||||| |||||| || |||||||||||||
Sbjct: 427 ttttggttgttggattggtttgggctcttgtggttttgattaaaagagatatgaagcttg 368
Query: 1688 atgcagtccttggaggagggcttctagttgtttacttcatttctctgtttctaaggctgg 1747
||| |||| | |||||||||||| ||||||||||| | |||||| ||||||| ||||||
Sbjct: 367 atggagtcttgggaggagggcttttagttgtttacgttatttctttgtttctgaggctga 308
Query: 1748 ttca 1751
||||
Sbjct: 307 ttca 304
>gnl|LJGI|TC77211 weakly similar to UniRef100_A7QRH9 Cluster: Chromosome chr8
scaffold_150, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_150, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 699
Score = 119 bits (60), Expect = 6e-26
Identities = 210/260 (80%)
Strand = Plus / Plus
Query: 274 ccatgtgtttctcagggctatgttgattacctttaccttttctattgcaaatttgggggg 333
|||||||| ||| |||| ||| |||||||||||||||||||| ||||| |||||||| |
Sbjct: 247 ccatgtgtctctgagggatatattgattacctttaccttttccattgccaatttgggaga 306
Query: 334 tttcctatattgggtcattttctgttgttgctctggctattggttctgttttatctgctg 393
|| ||| |||||||| | ||| ||||| |||||||| | |||||||||||||| ||
Sbjct: 307 ttccctctattgggttacactcttttgtttctctggctccttgttctgttttatctcttg 366
Query: 394 gcaaacactgcttctgattatttttgtccttcccttgaacatttgtctaagttgctgagg 453
|| | || ||||||| ||||||||||||||||| ||| | | ||||| ||||||||
Sbjct: 367 gctagtacaacttctgagtatttttgtccttccctggaaaacctctctaaattgctgaga 426
Query: 454 ctatcccctgctattgctggagtgacccttctatctcttggcaatggtgcttgtgatgtt 513
| || ||| | ||||| |||||||| ||||| |||||||| |||||||| |||||||
Sbjct: 427 ttgtcacctacaattgcgggagtgactcttctctctcttggaaatggtgcgcctgatgtt 486
Query: 514 tttgccacccttgtttcttt 533
|| ||| |||||| |||||
Sbjct: 487 ttctccagccttgtctcttt 506