Miyakogusa Predicted Gene
- Lj1g3v3979330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3979330.1 Non Chatacterized Hit- tr|I1N8D4|I1N8D4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.15,0,CATIONIC
AMINO ACID TRANSPORTER,Cationic amino acid transporter; AMINO ACID
TRANSPORTER,Amino acid/p,CUFF.31734.1
(1923 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79445 similar to UniRef100_A7QRK1 Cluster: Chromosome... 848 0.0
gnl|LJGI|TC82799 similar to UniRef100_A7QRK1 Cluster: Chromosome... 642 0.0
gnl|LJGI|TC69002 weakly similar to UniRef100_Q9FIV7 Cluster: Cat... 141 2e-32
gnl|LJGI|TC81626 homologue to UniRef100_Q2HVB3 Cluster: Amino ac... 80 6e-14
gnl|LJGI|TC82667 76 9e-13
gnl|LJGI|FS327484 similar to UniRef100_O04894 Cluster: Transaldo... 58 2e-07
>gnl|LJGI|TC79445 similar to UniRef100_A7QRK1 Cluster: Chromosome chr8 scaffold_150,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_150, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 428
Score = 848 bits (428), Expect = 0.0
Identities = 428/428 (100%)
Strand = Plus / Plus
Query: 1214 ttttagcattcaccattgtagcaatatgtgtgttgatactaaggtatatccctccaaatg 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttagcattcaccattgtagcaatatgtgtgttgatactaaggtatatccctccaaatg 60
Query: 1274 aagttccgttgcctccttctatccaggattcaattacttcagtgtcaacggggtatagtt 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagttccgttgcctccttctatccaggattcaattacttcagtgtcaacggggtatagtt 120
Query: 1334 tgagcagtgcagagagcaatgtagaatatgcagaggcatatgccagtatttccgaggact 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgagcagtgcagagagcaatgtagaatatgcagaggcatatgccagtatttccgaggact 180
Query: 1394 caaaacccttagttgttaaggaggatgtttccattcgttatcctctcattgctaaacatc 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaaacccttagttgttaaggaggatgtttccattcgttatcctctcattgctaaacatc 240
Query: 1454 ttggcataggctactatctgaatgatggtaacagacgaagagttgttgggtggagcataa 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggcataggctactatctgaatgatggtaacagacgaagagttgttgggtggagcataa 300
Query: 1514 cattcatatgcttaggggcgtttgtcctcacatatgcaacttcatatatacctcttattt 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cattcatatgcttaggggcgtttgtcctcacatatgcaacttcatatatacctcttattt 360
Query: 1574 ttgttcgctttgtgctatgtggagttggcggtattcttcttgtgtctggtcttgtcttcc 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgttcgctttgtgctatgtggagttggcggtattcttcttgtgtctggtcttgtcttcc 420
Query: 1634 taacctgt 1641
||||||||
Sbjct: 421 taacctgt 428
>gnl|LJGI|TC82799 similar to UniRef100_A7QRK1 Cluster: Chromosome chr8 scaffold_150,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_150, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 1203
Score = 642 bits (324), Expect = 0.0
Identities = 800/956 (83%), Gaps = 2/956 (0%)
Strand = Plus / Plus
Query: 115 cttgcaaaggagttaactgttcttcatctcattgcagttggtgttggttcaacaattggc 174
||||| |||||||||||||||| |||||||| ||| |||| || ||| | || ||||
Sbjct: 249 cttgccaaggagttaactgttccgcatctcatggcaattggcgtgggtgctacggttggt 308
Query: 175 gctggagtatatgttttggttggaacagttgctcgagagcaagctggaccagccatagcc 234
||||| || |||||| |||||||||| || || || ||||| |||||||| || | |
Sbjct: 309 gctggtgtgtatgttctggttggaacggtggcgcgtgagcacgctggaccggctttgccg 368
Query: 235 atttcttttctggttgctggattagctgctggtctttctgctttttgctatgcagagctg 294
|||| ||||||||||||||||| || |||| ||| || ||| | |||||||| ||| ||
Sbjct: 369 ctttcgtttctggttgctggatttgcagctgctctctcagctctctgctatgcggagttg 428
Query: 295 gcttgtcgttttccttcagctggaagtgcatatcactattcatacatatgtcttggggaa 354
||| |||| | |||||| ||||| ||||| ||||||||||||||||||||| ||||||||
Sbjct: 429 gctagtcgctgtccttctgctgggagtgcgtatcactattcatacatatgtgttggggaa 488
Query: 355 ggtgttgcttggttgatcggttggtccttgctactggaatatacaattggtagcgctgct 414
|| |||||||||||| | |||||| |||| || ||||||||||||||||| | ||||||
Sbjct: 489 ggagttgcttggttggttggttgggccttaatattggaatatacaattggtggagctgct 548
Query: 415 gtcgctcgtggcataaccccaaatttggcttcactttttgggggtatggacaatttacca 474
|| ||||||||||||||||| ||| ||||| ||||| |||| || |||||||||| ||
Sbjct: 549 gttgctcgtggcataacccccaatatggctgcacttattggaggagtggacaatttgccc 608
Query: 475 atctttttatcacgccagcatattcctgggattgatattgttgtggacccatgtgcagca 534
| |||| || | | || | ||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 609 agctttctagcgagtcaccgtattcctgggattgacattgttgtagacccttgtgcagca 668
Query: 535 attttggtatttattgttaccggactcctgtgtgtggggatcaaggagagtgcagtggta 594
||| | |||||||| |||| ||||| || ||| |||||||| ||||| || |||||
Sbjct: 669 attatagtatttataattactggacttctttgtactgggatcaaagagagcacaatggta 728
Query: 595 caaggcatagtcacatcagtaaatatatgtgcattgctttttgtcattgcagctggtggt 654
||| | ||||||||||||| || |||||||| ||| |||||||||| | ||||||||||
Sbjct: 729 caaagtgtagtcacatcagtgaacatatgtgctttgatttttgtcatagtagctggtggt 788
Query: 655 tatttgggtttcaagtctggatgggttggatatgaacttcaatctgggtttttccccttt 714
|| ||||| ||||| |||||||||||||||||| |||||| |||||| ||| || |||
Sbjct: 789 tacttgggattcaaatctggatgggttggatatcaacttcctactgggtattttccattt 848
Query: 715 gggtttgatgggatgcttgctggttctgcaacagtcttctttgcatatgtaggttttgat 774
||| | |||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||
Sbjct: 849 ggggtagatgggatgcttgctggttcagcaacagtcttttttgcatatataggatttgat 908
Query: 775 gctgttgccagtactgctgaagaggtgaaaaatcctcaaagagatttgcctctaggtatt 834
|| |||||||| ||||||||||||||||||||||||||| ||||| |||| || ||||||
Sbjct: 909 gcagttgccagcactgctgaagaggtgaaaaatcctcaacgagatctgccactgggtatt 968
Query: 835 ggcggttcactgtttctttgttgtggaatgtatgtgatggtgtccattgttgtagttggt 894
|| | ||||| ||||| ||||||||| | || ||||||| ||||||||||| || |||
Sbjct: 969 ggtgcatcactatttctctgttgtggattatacatgatggtttccattgttgttgtcggt 1028
Query: 895 ttagtaccttattatgcgatggatctggatacccccatatcatctgcatttgctgaccat 954
||||||||||||||||| || || || ||||||||||||||||||||||||||| ||
Sbjct: 1029 ttagtaccttattatgctatccattctgagacccccatatcatctgcatttgctgacaat 1088
Query: 955 ggaatgcaatgggcagcttacattctaaatgctggagctttcacagctctcttgtccgca 1014
|| |||||||||||||| ||| || |||||||||| || || |||||||| | || |||
Sbjct: 1089 gggatgcaatgggcagcatacgttgtaaatgctggggcctttacagctctatgctcagca 1148
Query: 1015 ttgatgggtgggatacttccccagccaagagttatgatggctatggcaagggatgg 1070
||||||||||||||| | || ||||| ||| || ||||||||||||||||||||||
Sbjct: 1149 ttgatgggtgggatattgcctcagcc-aga-ttttgatggctatggcaagggatgg 1202
>gnl|LJGI|TC69002 weakly similar to UniRef100_Q9FIV7 Cluster: Cationic amino acid
transporter-like protein; n=1; Arabidopsis thaliana|Rep:
Cationic amino acid transporter-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (19%)
Length = 557
Score = 141 bits (71), Expect = 2e-32
Identities = 148/173 (85%), Gaps = 3/173 (1%)
Strand = Plus / Plus
Query: 1533 gtttgtcctcacatatgcaacttcatatatacctcttat---ttttgttcgctttgtgct 1589
||||||||| |||| |||| ||||| ||||| ||||| | || | ||||||||| |
Sbjct: 385 gtttgtccttacatttgcagcttcaaatataactcttctcagttctcttcgctttgcatt 444
Query: 1590 atgtggagttggcggtattcttcttgtgtctggtcttgtcttcctaacctgtatagatca 1649
||||||| |||| || | ||||||| |||||||| ||||||||||||||||||| || ||
Sbjct: 445 atgtggaattggtgggactcttcttttgtctggttttgtcttcctaacctgtatggagca 504
Query: 1650 agatgatgcaaggcacaactttgggcactctggaggtttcatatgcccatttg 1702
|||||||||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 505 agatgatgcaagacacaactttgggcactcaggaggtttcatttgcccatttg 557
Score = 107 bits (54), Expect = 3e-22
Identities = 135/162 (83%)
Strand = Plus / Plus
Query: 1137 tactggccttggggctgcaatcttggcattttctatggaagtctctcaactgacagggat 1196
|||||||||||| |||||| ||||||||||| | |||||||||||| || || | |||||
Sbjct: 4 tactggccttggtgctgcagtcttggcatttaccatggaagtctctgaattggctgggat 63
Query: 1197 ggttagtgtgggtacgcttttagcattcaccattgtagcaatatgtgtgttgatactaag 1256
||||||||||||||| ||| | |||||||||| || ||||| | ||| |||||||| ||
Sbjct: 64 ggttagtgtgggtacacttcttgcattcaccacggtggcaatctctgtattgatactgag 123
Query: 1257 gtatatccctccaaatgaagttccgttgcctccttctatcca 1298
||||| || ||| ||| ||||| ||||| |||||| ||||
Sbjct: 124 atatattccaccagatgtggttccattgcccccttctctcca 165
>gnl|LJGI|TC81626 homologue to UniRef100_Q2HVB3 Cluster: Amino acid/polyamine
transporter I; n=2; Medicago truncatula|Rep: Amino
acid/polyamine transporter I - Medicago truncatula
(Barrel medic), partial (29%)
Length = 564
Score = 79.8 bits (40), Expect = 6e-14
Identities = 157/196 (80%)
Strand = Plus / Plus
Query: 248 ttgctggattagctgctggtctttctgctttttgctatgcagagctggcttgtcgttttc 307
|||| ||| ||||||||| || || ||||| || ||||||||||| || ||||| | |
Sbjct: 175 ttgcaggaatagctgctgcgctatcagctttgtgttatgcagagcttgcatgtcgatgcc 234
Query: 308 cttcagctggaagtgcatatcactattcatacatatgtcttggggaaggtgttgcttggt 367
| || || || ||||| ||||| ||| |||||||||| |||| ||||| ||||||||||
Sbjct: 235 catctgcagggagtgcttatcattatacatacatatgcattggagaaggggttgcttggt 294
Query: 368 tgatcggttggtccttgctactggaatatacaattggtagcgctgctgtcgctcgtggca 427
|| | ||||||||| | | || ||||||||||||||| | ||||| ||||||||||
Sbjct: 295 tggttggttggtccctaattctagaatatacaattggtgcttcggctgttgctcgtggca 354
Query: 428 taaccccaaatttggc 443
||||||| ||| ||||
Sbjct: 355 taaccccgaatctggc 370
>gnl|LJGI|TC82667
Length = 816
Score = 75.8 bits (38), Expect = 9e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1492 agagttgttgggtggagcataacattcatatgcttaggggcgtttgtcctcacatatgca 1551
||||||| |||||||| |||| ||| |||||||||||||| |||| ||||||||||||||
Sbjct: 461 agagttgctgggtggatcatatcatccatatgcttaggggagttt-tcctcacatatgca 519
Query: 1552 acttcatata 1561
|||||||||
Sbjct: 520 gcttcatata 529
>gnl|LJGI|FS327484 similar to UniRef100_O04894 Cluster: Transaldolase; n=1; Solanum
tuberosum|Rep: Transaldolase - Solanum tuberosum
(Potato), partial (5%)
Length = 734
Score = 58.0 bits (29), Expect = 2e-07
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1364 cagaggcatatgccagtatttccgaggactcaaaacccttagttgttaaggaggatgttt 1423
|||||||| |||||| || |||||| ||| ||||||| |||||| ||| |||||||||||
Sbjct: 238 cagaggcaaatgccaatacttccgatgacacaaaacctttagtttttacggaggatgttt 297
Query: 1424 ccattcgttatcc 1436
| || |||||||
Sbjct: 298 acgtttgttatcc 310