Miyakogusa Predicted Gene
- Lj1g3v3979290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3979290.1 Non Chatacterized Hit- tr|B9IBL1|B9IBL1_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,32.14,2e-16,DUF2215,Transmembrane protein 194; seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.31727.1
(1539 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57203 similar to UniRef100_A7PTE1 Cluster: Chromosome... 2904 0.0
gnl|LJGI|GO008839 weakly similar to UniRef100_Q9SHQ6 Cluster: F1... 305 4e-82
>gnl|LJGI|TC57203 similar to UniRef100_A7PTE1 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 1811
Score = 2904 bits (1465), Expect = 0.0
Identities = 1465/1465 (100%)
Strand = Plus / Plus
Query: 75 cacactcgccgatcacactaccaccacgctcaaagatgttaatattgaaaggccagtttt 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 cacactcgccgatcacactaccaccacgctcaaagatgttaatattgaaaggccagtttt 176
Query: 135 ggatgtatccccttccccactttctgggtatccagctgctcaaggggtcaaaaacatttt 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ggatgtatccccttccccactttctgggtatccagctgctcaaggggtcaaaaacatttt 236
Query: 195 gaaatgtgaacgtgttcaagtttctggtatctcaagattgaaacttgggagctacgctaa 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gaaatgtgaacgtgttcaagtttctggtatctcaagattgaaacttgggagctacgctaa 296
Query: 255 ttcattccatattactctggctccatctgttacaatcccagagagattacataataaaat 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttcattccatattactctggctccatctgttacaatcccagagagattacataataaaat 356
Query: 315 tcaggtttgtttccacaggaataatacacttggatggtgtcagtgtgaaaaggatgaatg 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tcaggtttgtttccacaggaataatacacttggatggtgtcagtgtgaaaaggatgaatg 416
Query: 375 gaagagtgtacagaaggggatctgggatgttgttatgtcaccttatgaaactagatatgt 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaagagtgtacagaaggggatctgggatgttgttatgtcaccttatgaaactagatatgt 476
Query: 435 tgatgtgaggattgatggtgacatatcagggcctgttacagttgcgcttgaagaagattc 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tgatgtgaggattgatggtgacatatcagggcctgttacagttgcgcttgaagaagattc 536
Query: 495 tcagcaatggcgcctcgtttgtcttgctatcgggctgattctgctgttgttggctccaat 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tcagcaatggcgcctcgtttgtcttgctatcgggctgattctgctgttgttggctccaat 596
Query: 555 tcttagcaattgggttccattttattatagcagttcgatggctataggaatttttcttgt 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tcttagcaattgggttccattttattatagcagttcgatggctataggaatttttcttgt 656
Query: 615 cattataatccttctttttcagggcatgaaattattgccaactggaagaaaaaatatcct 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cattataatccttctttttcagggcatgaaattattgccaactggaagaaaaaatatcct 716
Query: 675 ttactttaccatatatggaccagtgctttgggttgggaaatacctgttacaccaattctc 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ttactttaccatatatggaccagtgctttgggttgggaaatacctgttacaccaattctc 776
Query: 735 tatgatcgcaaattcaatacttcagagttttgggatgaatgaagagatgcacaacttagt 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 tatgatcgcaaattcaatacttcagagttttgggatgaatgaagagatgcacaacttagt 836
Query: 795 tacttttattgtcctactggttatcgtcttggctggggctgctttaggctactggattgt 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tacttttattgtcctactggttatcgtcttggctggggctgctttaggctactggattgt 896
Query: 855 taggagatttgttatttcaaaagaagatggtagtgtggatgctggggttgctgagtttgt 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 taggagatttgttatttcaaaagaagatggtagtgtggatgctggggttgctgagtttgt 956
Query: 915 gaaatgggcaatgcgcatttttggatacaccttcatttggcagagcactctagaccttac 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 gaaatgggcaatgcgcatttttggatacaccttcatttggcagagcactctagaccttac 1016
Query: 975 tctagcagttggagcgttggtctcttctgtagctgtttgcgaacttgtttactcgataca 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 tctagcagttggagcgttggtctcttctgtagctgtttgcgaacttgtttactcgataca 1076
Query: 1035 atggcttcatgaatggtatgaaacttcagggaatgatgattattcactggagtggatgaa 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 atggcttcatgaatggtatgaaacttcagggaatgatgattattcactggagtggatgaa 1136
Query: 1095 aggaacacgtggtcgtgctgaattccttggtaagtcaacccctaaaagaaagatgtcgag 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 aggaacacgtggtcgtgctgaattccttggtaagtcaacccctaaaagaaagatgtcgag 1196
Query: 1155 aagccctcaaggaaaattatggaacagccctaaaagatcatcatggtctgactcccctgt 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 aagccctcaaggaaaattatggaacagccctaaaagatcatcatggtctgactcccctgt 1256
Query: 1215 gagaggtgttgtatctccatcttctgggatttcgccactatcctgtgtggctcaagtaga 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 gagaggtgttgtatctccatcttctgggatttcgccactatcctgtgtggctcaagtaga 1316
Query: 1275 gccggattattattcaaccttccacaagactcgcaacagaaagaagttcacaaagaacga 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 gccggattattattcaaccttccacaagactcgcaacagaaagaagttcacaaagaacga 1376
Query: 1335 gtgggatgagttcactagagaatccactaagcaagctctagcagaatgggcagcatctcc 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 gtgggatgagttcactagagaatccactaagcaagctctagcagaatgggcagcatctcc 1436
Query: 1395 agaattcactgagtgggtcattgagcacgcagaccggataaaactcgttccaagtgagaa 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1437 agaattcactgagtgggtcattgagcacgcagaccggataaaactcgttccaagtgagaa 1496
Query: 1455 ttcagacgaggcaattggaagtgaatcagattccacagaggtgggaagtgggaatggatt 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1497 ttcagacgaggcaattggaagtgaatcagattccacagaggtgggaagtgggaatggatt 1556
Query: 1515 tcggcttttcaattggtggtgactc 1539
|||||||||||||||||||||||||
Sbjct: 1557 tcggcttttcaattggtggtgactc 1581
Score = 71.9 bits (36), Expect = 1e-11
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 atggagcgtttctcccccaccaccacactgttccat 36
||||||||||||||||||||||||||||||||||||
Sbjct: 43 atggagcgtttctcccccaccaccacactgttccat 78
>gnl|LJGI|GO008839 weakly similar to UniRef100_Q9SHQ6 Cluster: F1K23.6; n=1;
Arabidopsis thaliana|Rep: F1K23.6 - Arabidopsis thaliana
(Mouse-ear cress), partial (10%)
Length = 322
Score = 305 bits (154), Expect = 4e-82
Identities = 157/158 (99%)
Strand = Plus / Plus
Query: 820 gtcttggctggggctgctttaggctactggattgttaggagatttgttatttcaaaagaa 879
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gtcttgcctggggctgctttaggctactggattgttaggagatttgttatttcaaaagaa 224
Query: 880 gatggtagtgtggatgctggggttgctgagtttgtgaaatgggcaatgcgcatttttgga 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gatggtagtgtggatgctggggttgctgagtttgtgaaatgggcaatgcgcatttttgga 284
Query: 940 tacaccttcatttggcagagcactctagaccttactct 977
||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tacaccttcatttggcagagcactctagaccttactct 322