Miyakogusa Predicted Gene
- Lj1g3v3976000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3976000.1 Non Chatacterized Hit- tr|I1MW66|I1MW66_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27788
PE,57.09,0,Ribonuclease H-like,Ribonuclease H-like domain;
HRDC-like,HRDC-like; 3'-5' exonuclease,3'-5' exonucl,CUFF.31712.1
(2169 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV773940 similar to UniRef100_A7QRH3 Cluster: Chromosom... 373 e-102
gnl|LJGI|DC597059 weakly similar to UniRef100_UPI0000EB035E Clus... 313 3e-84
gnl|LJGI|TC62119 similar to UniRef100_Q9FFL2 Cluster: Nucleolar ... 62 2e-08
>gnl|LJGI|AV773940 similar to UniRef100_A7QRH3 Cluster: Chromosome chr8 scaffold_150,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_150, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 455
Score = 373 bits (188), Expect = e-102
Identities = 197/200 (98%)
Strand = Plus / Minus
Query: 529 ttggagaagagtgatgatggccagaggtttattcatccactggagaaactctcggttttg 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttggagaagagtgatgatggccagaggtttattcatccactggagaaactctcggttttg 396
Query: 589 gattttgtagacaaagatcttgagaatcttgtaccagtaaagcctcccccacttgaatgc 648
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 395 gattttgtagacaaagatcttgagaatcttgtaccagtcaagcctcccccacttgaatgc 336
Query: 649 acccctttcaagcttgtggaggatgtcaaagggttgaaggagttggctactaagctgtat 708
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 335 acccctttccagcttgtggaggatgtcaaaggcttgaaggagttggctactaagctgtat 276
Query: 709 tcagttaatgaatttgcggt 728
||||||||||||||||||||
Sbjct: 275 tcagttaatgaatttgcggt 256
>gnl|LJGI|DC597059 weakly similar to UniRef100_UPI0000EB035E Cluster: Mucin-13
precursor (Down-regulated in colon cancer 1).; n=1;
Canis lupus familiaris|Rep: Mucin-13 precursor
(Down-regulated in colon cancer 1). - Canis familiaris,
partial (6%)
Length = 243
Score = 313 bits (158), Expect = 3e-84
Identities = 161/162 (99%)
Strand = Plus / Plus
Query: 1 atgagccacgacggcagcgtcgatcatcacctggcggagctttccacctcctcacaccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atgagccacgacggcagcgtcgatcatcacctggcggagctttccacctcctcacaccgc 141
Query: 61 attccctccaacgacgacttccacttctactacaaattcaacgaattcaaacgcccgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 attccctccaacgacgacttccacttctactacaaattcaacgaattcaaacgcccgctt 201
Query: 121 gaagaaatcgcgatgcggacgcagtcgatgctgaccagaatc 162
|||||||||||||||||||||||||| |||||||||||||||
Sbjct: 202 gaagaaatcgcgatgcggacgcagtcaatgctgaccagaatc 243
>gnl|LJGI|TC62119 similar to UniRef100_Q9FFL2 Cluster: Nucleolar protein-like; n=1;
Arabidopsis thaliana|Rep: Nucleolar protein-like -
Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 749
Score = 61.9 bits (31), Expect = 2e-08
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 505 aacaagccttttcagcatgttttgttggagaagagtgatgatggccagaggtttattcat 564
|||| ||||||| | ||||||| |||| ||| |||||| ||||| | ||||||||||||
Sbjct: 614 aacatgccttttgaacatgtttggttgcagaggagtgaggatggtgacaggtttattcat 673
Query: 565 ccactggagaaactctcggttttggattttgtagacaaagatc 607
|||||||| || ||| || ||||||||||| || |||||||
Sbjct: 674 ccactggaaaagatctttgtattggattttgttgataaagatc 716