Miyakogusa Predicted Gene
- Lj1g3v3975890.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3975890.1 Non Chatacterized Hit- tr|I1IJ35|I1IJ35_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,47.17,2e-19,DDE_4,NULL; UNCHARACTERIZED,Harbinger
transposase-derived nuclease,gene.g35858.t1.1
(534 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036207 similar to UniRef100_A2Q269 Cluster: Trp repre... 105 3e-22
gnl|LJGI|TC73106 similar to UniRef100_A7QX90 Cluster: Chromosome... 105 3e-22
gnl|LJGI|TC65264 similar to UniRef100_A2Q269 Cluster: Trp repres... 98 7e-20
gnl|LJGI|GO030889 weakly similar to UniRef100_A7PIZ9 Cluster: Ch... 54 9e-07
gnl|LJGI|TC78724 homologue to UniRef100_A7QAX6 Cluster: Chromoso... 54 9e-07
>gnl|LJGI|GO036207 similar to UniRef100_A2Q269 Cluster: Trp repressor/replication
initiator; n=1; Medicago truncatula|Rep: Trp
repressor/replication initiator - Medicago truncatula
(Barrel medic), partial (11%)
Length = 688
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 atgtgtttagcttccacagaacctcataatgatgtgtggcttgaccatgagaagaaacat 60
|||||||||||||| ||| |||||||||| || |||||||||||||||||||||||||||
Sbjct: 471 atgtgtttagcttctacataacctcataaggaagtgtggcttgaccatgagaagaaacat 530
Query: 61 agcatggtc 69
|||||||||
Sbjct: 531 agcatggtc 539
>gnl|LJGI|TC73106 similar to UniRef100_A7QX90 Cluster: Chromosome undetermined
scaffold_215, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_215,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (14%)
Length = 1300
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 atgtgtttagcttccacagaacctcataatgatgtgtggcttgaccatgagaagaaacat 60
|||||||||||||| ||| |||||||||| || |||||||||||||||||||||||||||
Sbjct: 900 atgtgtttagcttctacataacctcataaggaagtgtggcttgaccatgagaagaaacat 959
Query: 61 agcatggtc 69
|||||||||
Sbjct: 960 agcatggtc 968
>gnl|LJGI|TC65264 similar to UniRef100_A2Q269 Cluster: Trp repressor/replication
initiator; n=1; Medicago truncatula|Rep: Trp
repressor/replication initiator - Medicago truncatula
(Barrel medic), partial (6%)
Length = 1034
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 atgtgtttagcttccacagaacctcataatgatgtgtggcttgaccatgagaagaaacat 60
|||||||||||||| ||| |||||||||| || |||||||||| ||||||||||||||||
Sbjct: 638 atgtgtttagcttctacataacctcataaggaagtgtggcttggccatgagaagaaacat 697
Query: 61 agcatggtc 69
|||||||||
Sbjct: 698 agcatggtc 706
>gnl|LJGI|GO030889 weakly similar to UniRef100_A7PIZ9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (45%)
Length = 618
Score = 54.0 bits (27), Expect = 9e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 328 atgtggaggcctgacaaacataggttgccaagcattatccatgtttgctgcatacttcac 387
||||||| |||||| || || | ||| ||||| ||| ||| ||||||||||||||| ||
Sbjct: 297 atgtggaagcctgataagcacaagttaccaagaattgtccttgtttgctgcatactgcat 238
Query: 388 aacattgtgattgatatgg 406
|| || |||||||||||||
Sbjct: 237 aatatagtgattgatatgg 219
>gnl|LJGI|TC78724 homologue to UniRef100_A7QAX6 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 738
Score = 54.0 bits (27), Expect = 9e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 1 atgtgtttagcttccacagaacctcataatgatgtgtggcttg 43
|||||||||||||| ||| |||||||||| || ||||||||||
Sbjct: 695 atgtgtttagcttctacataacctcataaggaagtgtggcttg 737