Miyakogusa Predicted Gene
- Lj1g3v3975290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3975290.1 Non Chatacterized Hit- tr|F6GUN1|F6GUN1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,93.1,0,seg,NULL; TUBULIN,Tubulin; Tubulin nucleotide-binding
domain-like,Tubulin/FtsZ, GTPase domain; Tubul,CUFF.31659.1
(1353 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79990 homologue to UniRef100_A8DS92 Cluster: Alpha-tu... 1187 0.0
gnl|LJGI|TC81473 homologue to UniRef100_Q5G277 Cluster: Alpha-tu... 456 e-127
gnl|LJGI|TC63835 homologue to UniRef100_Q2TFP2 Cluster: Tubulin ... 442 e-123
gnl|LJGI|TC62930 homologue to UniRef100_A9PL19 Cluster: Alpha-tu... 264 1e-69
gnl|LJGI|DN652314 similar to UniRef100_P50258 Cluster: Tubulin a... 52 9e-06
>gnl|LJGI|TC79990 homologue to UniRef100_A8DS92 Cluster: Alpha-tubulin 6; n=1;
Populus tremuloides|Rep: Alpha-tubulin 6 - Populus
tremuloides (Quaking aspen), partial (44%)
Length = 743
Score = 1187 bits (599), Expect = 0.0
Identities = 599/599 (100%)
Strand = Plus / Plus
Query: 1 atgagggaggtcataagtattcatattggacaagctggaattcaagtggggaattcatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atgagggaggtcataagtattcatattggacaagctggaattcaagtggggaattcatgt 204
Query: 61 tgggagctgtattgccttgagcatggaattcaacctgatggcatgatgccaagtgatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgggagctgtattgccttgagcatggaattcaacctgatggcatgatgccaagtgatacc 264
Query: 121 tcagttggcatttcaaatgatgcttttaacaccttcttcagtgaaacgggttccggtaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcagttggcatttcaaatgatgcttttaacaccttcttcagtgaaacgggttccggtaag 324
Query: 181 catgtgccgagggctttatttgttgatctagaacctagtgttattgatgaagtaagaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgtgccgagggctttatttgttgatctagaacctagtgttattgatgaagtaagaact 384
Query: 241 ggtgagtacagacaactctttcaccctgagcagttgatctctggcaaggaagatgctgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgagtacagacaactctttcaccctgagcagttgatctctggcaaggaagatgctgct 444
Query: 301 aataattttgcaaggggacactatactgttggaagagaaattgttgaactatgccttgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aataattttgcaaggggacactatactgttggaagagaaattgttgaactatgccttgac 504
Query: 361 cggacccgaaaattagcggataattgcactggtttgcaaggattcttggttttcaatgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cggacccgaaaattagcggataattgcactggtttgcaaggattcttggttttcaatgct 564
Query: 421 gtcggtggtggtaccggttctggtttgggatcattacttttggaacggttgtctgtggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtcggtggtggtaccggttctggtttgggatcattacttttggaacggttgtctgtggat 624
Query: 481 tatgggaagaagtctaaacttggctttaccatctatccctctcctcaggtatctactgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tatgggaagaagtctaaacttggctttaccatctatccctctcctcaggtatctactgca 684
Query: 541 gttgttgaaccttacaacagtgttctttccactcattctcttcttgagcacactgatgt 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gttgttgaaccttacaacagtgttctttccactcattctcttcttgagcacactgatgt 743
>gnl|LJGI|TC81473 homologue to UniRef100_Q5G277 Cluster: Alpha-tubulin; n=2;
Ceratopteris richardii|Rep: Alpha-tubulin - Ceratopteris
richardii (Triangle waterfern), partial (27%)
Length = 494
Score = 456 bits (230), Expect = e-127
Identities = 230/230 (100%)
Strand = Plus / Plus
Query: 1124 tttgtatgatcagcaacaacactgctgttgctgaagtcttctctcgcattgattataagt 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgtatgatcagcaacaacactgctgttgctgaagtcttctctcgcattgattataagt 60
Query: 1184 tcgatctcatgtactctaagcgggcatttgtccactggtatgtgggtgaaggaatggaag 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgatctcatgtactctaagcgggcatttgtccactggtatgtgggtgaaggaatggaag 120
Query: 1244 aaggtgaattctcagaagcccgggaggatctcgctgctctcgaaaaggattatgaagaag 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaggtgaattctcagaagcccgggaggatctcgctgctctcgaaaaggattatgaagaag 180
Query: 1304 ttggagctgaaggtgaagagggtgaagaagatgaagaaggttattgagaa 1353
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggagctgaaggtgaagagggtgaagaagatgaagaaggttattgagaa 230
>gnl|LJGI|TC63835 homologue to UniRef100_Q2TFP2 Cluster: Tubulin A; n=1; Glycine
max|Rep: Tubulin A - Glycine max (Soybean), complete
Length = 1711
Score = 442 bits (223), Expect = e-123
Identities = 694/851 (81%)
Strand = Plus / Plus
Query: 463 gaacggttgtctgtggattatgggaagaagtctaaacttggctttaccatctatccctct 522
|||||||| || || ||||| || ||||| || ||||| || || |||||||| || ||
Sbjct: 567 gaacggttatccgtcgattacggcaagaaatccaaactaggtttcaccatctacccttcc 626
Query: 523 cctcaggtatctactgcagttgttgaaccttacaacagtgttctttccactcattctctt 582
|||||||| || || || ||||| || ||||||||||| ||||| || || ||||| ||
Sbjct: 627 cctcaggtttccacggcggttgtggagccttacaacagcgttctctcgacgcattcgctc 686
Query: 583 cttgagcacactgatgtagttgtacttttggacaatgaggcaatatatgatatctgcaga 642
||||||||||||||||| | ||| || ||||||||||| || || ||||| || |||||
Sbjct: 687 cttgagcacactgatgtggctgtgctgttggacaatgaagcgatctatgacatttgcagg 746
Query: 643 agatcattagatatagaaaggccaacttacaccaacttgaatcgtctaatttctcaagtt 702
||||| | ||||| || ||||| || ||||| |||||||| | || || ||||| |
Sbjct: 747 agatctcttgatattgagaggcctacgtacacgaacttgaacaggcttatctctcagatc 806
Query: 703 atctcttccttgaccacatccttgagattcgatggcgcaattaacgtggacgttactgag 762
|| || || ||||| || || ||||| || ||||| || || || || || | ||||||
Sbjct: 807 atttcctcattgactacctctttgaggtttgatggtgcgatcaatgtagatatcactgag 866
Query: 763 tttcagactaacctggtaccatatccccgtatccatttcatgctttcatcgtatgctcct 822
|||||||||||||| || || ||||| |||||||||||||||||||| || ||||| ||
Sbjct: 867 tttcagactaaccttgtgccttatcctcgtatccatttcatgctttcgtcctatgcgccg 926
Query: 823 gtgatatctgctgcgaaggcctaccatgaacagatatcgattcctgagatcaccagtgct 882
|| || |||||||| |||||||||||||| ||| | ||| | ||||||||||||| |||
Sbjct: 927 gttatctctgctgctaaggcctaccatgagcagctttcggtgcctgagatcaccaatgcg 986
Query: 883 gtttttgagccatcaaatatgatggctaagtgtgatccaagacacgggaagtacatggcg 942
|| |||||||| || | |||||||| ||||||||||| || || ||||||||||||||
Sbjct: 987 gtgtttgagccttccagcatgatggcgaagtgtgatcctaggcatgggaagtacatggct 1046
Query: 943 tgttgccttatgtatcgtggagatgttgtgcccaaagatgtcaatgcagctgttgcaaat 1002
|| || | ||||| | ||||||||||| || || ||||||||||| |||||||| |
Sbjct: 1047 tgctgtttgatgtacaggggagatgttgttccgaaggatgtcaatgctgctgttgccacc 1106
Query: 1003 atcaagacgaagcgaacagttcagtttgttgactggtgtcctactggtttcaagtgtgga 1062
||||| || ||| | || |||||||||||||| ||||| || ||||||||||| |||||
Sbjct: 1107 atcaaaactaagaggactgttcagtttgttgattggtgcccaactggtttcaaatgtggt 1166
Query: 1063 atcaactaccagcctccaacagtggtaccagcaggtgatcttgccaaggtgcagcgcgca 1122
||||||||||||||||| |||| ||||| | ||||| ||||| ||||||||||| ||
Sbjct: 1167 atcaactaccagcctccttcagttgtacctggtggtgaccttgctaaggtgcagcgggct 1226
Query: 1123 gtttgtatgatcagcaacaacactgctgttgctgaagtcttctctcgcattgattataag 1182
||||| |||||||| ||||||||||| |||||||| || |||||||||||||| | |||
Sbjct: 1227 gtttgcatgatcagtaacaacactgcagttgctgaggtgttctctcgcattgaccacaag 1286
Query: 1183 ttcgatctcatgtactctaagcgggcatttgtccactggtatgtgggtgaaggaatggaa 1242
|| ||||||||||| | ||| |||| ||||||||||||||||| ||||| || ||||||
Sbjct: 1287 tttgatctcatgtatgccaagagggcctttgtccactggtatgttggtgagggtatggaa 1346
Query: 1243 gaaggtgaattctcagaagcccgggaggatctcgctgctctcgaaaaggattatgaagaa 1302
||||| || ||||||||||| || || ||||| |||||||| || || |||||||| |||
Sbjct: 1347 gaaggggagttctcagaagctcgtgaagatcttgctgctcttgagaaagattatgaggaa 1406
Query: 1303 gttggagctga 1313
||||| |||||
Sbjct: 1407 gttggtgctga 1417
>gnl|LJGI|TC62930 homologue to UniRef100_A9PL19 Cluster: Alpha-tubulin; n=2; Gossypium
hirsutum|Rep: Alpha-tubulin - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), complete
Length = 1918
Score = 264 bits (133), Expect = 1e-69
Identities = 730/929 (78%)
Strand = Plus / Plus
Query: 385 tgcactggtttgcaaggattcttggttttcaatgctgtcggtggtggtaccggttctggt 444
||||||||| ||||||| |||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 620 tgcactggtctgcaagggttcttggtcttcaatgctgttggtggaggaactggttctggg 679
Query: 445 ttgggatcattacttttggaacggttgtctgtggattatgggaagaagtctaaacttggc 504
| || || | || ||||| || | ||||| |||||||| ||||| || || || ||
Sbjct: 680 cttggttcccttctgttggagcgtctctctgttgattatggcaagaaatcgaagctcggg 739
Query: 505 tttaccatctatccctctcctcaggtatctactgcagttgttgaaccttacaacagtgtt 564
|| || | ||||||||||||||||| || || | ||||| || || |||||||||||
Sbjct: 740 ttcactgtgtatccctctcctcaggtgtccacctccgttgtggagccatacaacagtgtc 799
Query: 565 ctttccactcattctcttcttgagcacactgatgtagttgtacttttggacaatgaggca 624
|| || || || || || | |||||||||||||| | ||| ||| |||||||||| ||
Sbjct: 800 ctctctacccactccctcttggagcacactgatgttgctgttcttctggacaatgaagcc 859
Query: 625 atatatgatatctgcagaagatcattagatatagaaaggccaacttacaccaacttgaat 684
|| ||||| || || || | || | || || || | || || ||||||||| | ||
Sbjct: 860 atttatgacatttgtaggcgctcccttgacattgagcgtcccacctacaccaacctcaac 919
Query: 685 cgtctaatttctcaagttatctcttccttgaccacatccttgagattcgatggcgcaatt 744
||||| |||||||| || |||||||||||||| | || ||||||| ||||| || |
Sbjct: 920 cgtctcatttctcaggtgatctcttccttgactgcttctctgagatttgatggtgccctc 979
Query: 745 aacgtggacgttactgagtttcagactaacctggtaccatatccccgtatccatttcatg 804
|| ||||| || ||||| || ||||| || |||| || |||||| | |||||||| |||
Sbjct: 980 aatgtggatgtcactgaattccagaccaatttggttccttatcccaggatccattttatg 1039
Query: 805 ctttcatcgtatgctcctgtgatatctgctgcgaaggcctaccatgaacagatatcgatt 864
||||| ||||||||||| || || ||||||| |||||| |||||||| ||| | ||| |
Sbjct: 1040 ctttcctcgtatgctccagtaatctctgctgagaaggcttaccatgagcagctttcggtg 1099
Query: 865 cctgagatcaccagtgctgtttttgagccatcaaatatgatggctaagtgtgatccaaga 924
| || ||||||| || |||||||||||| |||||||| |||||||| || |
Sbjct: 1100 gcggaaatcaccaacagtgcatttgagccatcatccatgatggccaagtgtgaccctcgc 1159
Query: 925 cacgggaagtacatggcgtgttgccttatgtatcgtggagatgttgtgcccaaagatgtc 984
||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||||||
Sbjct: 1160 cacggaaagtacatggcgtgttgtctgatgtaccgtggtgatgttgtgcccaaagatgtg 1219
Query: 985 aatgcagctgttgcaaatatcaagacgaagcgaacagttcagtttgttgactggtgtcct 1044
||||| ||||||| ||||| || ||| |||| |||||||||| || ||||| |||
Sbjct: 1220 aatgctgctgttggctccatcaaaaccaagagaaccattcagtttgtagattggtgccct 1279
Query: 1045 actggtttcaagtgtggaatcaactaccagcctccaacagtggtaccagcaggtgatctt 1104
||||||||||| || || |||||||| ||||| || || || || || | ||||| |||
Sbjct: 1280 actggtttcaaatgcggtatcaactatcagccacccactgttgttccgggtggtgacctt 1339
Query: 1105 gccaaggtgcagcgcgcagtttgtatgatcagcaacaacactgctgttgctgaagtcttc 1164
|| ||||||||| | |||||||| ||||| ||| ||| |||||| || || |||
Sbjct: 1340 gcaaaggtgcagagggcagtttgcatgatttcaaactccaccagtgttgccgaggtgttc 1399
Query: 1165 tctcgcattgattataagttcgatctcatgtactctaagcgggcatttgtccactggtat 1224
||| |||||| ||||| ||||||||||| || ||||| || ||||||||||||||
Sbjct: 1400 agtcgtattgatgtaaagtttgatctcatgtattccaagcgtgcctttgtccactggtac 1459
Query: 1225 gtgggtgaaggaatggaagaaggtgaattctcagaagcccgggaggatctcgctgctctc 1284
|||||||| || ||||||||||||||||| || ||||| || || ||||| ||||||||
Sbjct: 1460 gtgggtgagggtatggaagaaggtgaattttctgaagctcgtgaagatcttgctgctctt 1519
Query: 1285 gaaaaggattatgaagaagttggagctga 1313
|||||||||||||||||||| || |||||
Sbjct: 1520 gaaaaggattatgaagaagtgggtgctga 1548
>gnl|LJGI|DN652314 similar to UniRef100_P50258 Cluster: Tubulin alpha-1A chain; n=1;
Physarum polycephalum|Rep: Tubulin alpha-1A chain -
Physarum polycephalum (Slime mold), partial (19%)
Length = 255
Score = 52.0 bits (26), Expect = 9e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 946 tgccttatgtatcgtggagatgttgtgcccaaagatgt 983
|||||||||||| | ||||||||||| |||||||||||
Sbjct: 155 tgccttatgtatagaggagatgttgttcccaaagatgt 192