Miyakogusa Predicted Gene
- Lj1g3v3975280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3975280.1 Non Chatacterized Hit- tr|I1QIL6|I1QIL6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,32.74,9e-19,PROTEIN DISULFIDE ISOMERASE,NULL;
Thioredoxin-like,Thioredoxin-like fold; no
description,Thioredoxin,CUFF.31646.1
(870 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV423063 weakly similar to UniRef100_A7PW43 Cluster: Ch... 874 0.0
gnl|LJGI|TC80861 similar to UniRef100_A7PW43 Cluster: Chromosome... 321 4e-87
gnl|LJGI|DC597739 289 1e-77
gnl|LJGI|TC76149 similar to UniRef100_A7PW43 Cluster: Chromosome... 170 9e-42
gnl|LJGI|TC79937 weakly similar to UniRef100_A7PW43 Cluster: Chr... 80 3e-14
>gnl|LJGI|AV423063 weakly similar to UniRef100_A7PW43 Cluster: Chromosome chr8
scaffold_34, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_34, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 447
Score = 874 bits (441), Expect = 0.0
Identities = 441/441 (100%)
Strand = Plus / Plus
Query: 1 atggtgacctcgctttttctcttcttcatcacttgtctctcttttctacaatcctcgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 atggtgacctcgctttttctcttcttcatcacttgtctctcttttctacaatcctcgtct 66
Query: 61 gccccttctccatcttctgcttcctttctgtttgctcttcaatctcaatgctcccttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gccccttctccatcttctgcttcctttctgtttgctcttcaatctcaatgctcccttgcc 126
Query: 121 atcacccccaatcctcctcttcaggtggatgggaatttcgtagaaagggttttgtctgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atcacccccaatcctcctcttcaggtggatgggaatttcgtagaaagggttttgtctgga 186
Query: 181 aggaagagagtcggttacatttctatactcttttatgcttcctggtgccctttttcacgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aggaagagagtcggttacatttctatactcttttatgcttcctggtgccctttttcacgc 246
Query: 241 agaatgctttctgaatttgaaatccttagttcaatgtttcctcaagtagagcatgtggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agaatgctttctgaatttgaaatccttagttcaatgtttcctcaagtagagcatgtggca 306
Query: 301 cttgaacaatcatctgctttgccaagcttatattcgaaatataggatccatagcttgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cttgaacaatcatctgctttgccaagcttatattcgaaatataggatccatagcttgcct 366
Query: 361 gctatcttactggtgaaccagacatctagggtgagatatcttggtgcaaaaaatctaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gctatcttactggtgaaccagacatctagggtgagatatcttggtgcaaaaaatctaaac 426
Query: 421 tccatcgttgaattttacgag 441
|||||||||||||||||||||
Sbjct: 427 tccatcgttgaattttacgag 447
>gnl|LJGI|TC80861 similar to UniRef100_A7PW43 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 468
Score = 321 bits (162), Expect = 4e-87
Identities = 165/166 (99%)
Strand = Plus / Plus
Query: 705 agtgattgggcgtgttcttaatcttattgatgtcaggagtgtttggaccaagctaagact 764
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5 agtgattgggcgtgttcttaatcttattgatgtcaggagtgtttggacccagctaagact 64
Query: 765 atgcaaaaccaggaactttcatgaaagggcgaggagtgtacgggtttgggcatcatctct 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atgcaaaaccaggaactttcatgaaagggcgaggagtgtacgggtttgggcatcatctct 124
Query: 825 ggcatctgtttctctgggcaagtcatcatcatcatctgctaggtaa 870
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggcatctgtttctctgggcaagtcatcatcatcatctgctaggtaa 170
>gnl|LJGI|DC597739
Length = 563
Score = 289 bits (146), Expect = 1e-77
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 1 atggtgacctcgctttttctcttcttcatcacttgtctctcttttctacaatcctcgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atggtgacctcgctttttctcttcttcatcacttgtctctcttttctacaatcctcgtct 279
Query: 61 gccccttctccatcttctgcttcctttctgtttgctcttcaatctcaatgctcccttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gccccttctccatcttctgcttcctttctgtttgctcttcaatctcaatgctcccttgcc 339
Query: 121 atcacccccaatcctcctcttcaggt 146
||||||||||||||||||||||||||
Sbjct: 340 atcacccccaatcctcctcttcaggt 365
>gnl|LJGI|TC76149 similar to UniRef100_A7PW43 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 699
Score = 170 bits (86), Expect = 9e-42
Identities = 185/218 (84%)
Strand = Plus / Plus
Query: 199 atttctatactcttttatgcttcctggtgccctttttcacgcagaatgctttctgaattt 258
|||||||| ||||| |||||||| |||||||| ||||||| || ||||||||| ||||
Sbjct: 223 atttctatgctcttctatgcttcatggtgcccattttcacaaaggatgctttctaaattc 282
Query: 259 gaaatccttagttcaatgtttcctcaagtagagcatgtggcacttgaacaatcatctgct 318
|||| ||||||||| |||||||||||| | |||||| ||| ||||| |||||||| |||
Sbjct: 283 gaaagccttagttccatgtttcctcaaattgagcatttggttcttgagcaatcatcagct 342
Query: 319 ttgccaagcttatattcgaaatataggatccatagcttgcctgctatcttactggtgaac 378
| ||||||||||||||| ||||| | || |||||||||||||| || ||||| ||||||
Sbjct: 343 tggccaagcttatattcaaaatacggaatacatagcttgcctgccatattacttgtgaac 402
Query: 379 cagacatctagggtgagatatcttggtgcaaaaaatct 416
||||| || ||| ||||||||| |||| ||||| ||||
Sbjct: 403 cagacctcaaggttgagatatcatggtccaaaatatct 440
Score = 52.0 bits (26), Expect = 6e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 544 aaagaattgtcaagcagggaaccttacttagcagtatctatattgtttctctgtttgagg 603
|||||| | ||||| |||||||||||||||| | ||||| |||||||||||||||||
Sbjct: 562 aaagaaatatcaagtagggaaccttacttagtatgctctattctgtttctctgtttgagg 621
Query: 604 at 605
||
Sbjct: 622 at 623
>gnl|LJGI|TC79937 weakly similar to UniRef100_A7PW43 Cluster: Chromosome chr8
scaffold_34, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_34, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 393
Score = 79.8 bits (40), Expect = 3e-14
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 762 actatgcaaaaccaggaactttcatgaaagggcgaggagtgtacgggtttgggcatcatc 821
||||||||| ||||||| ||||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 393 actatgcaagaccaggatttttcatgtaagggtgaggagtgctcgggtttgggcttcatc 334
Query: 822 tctggcatctgtttctctgggcaagtca 849
||| || ||||||||||| ||| |||||
Sbjct: 333 tctagcttctgtttctctaggcgagtca 306