Miyakogusa Predicted Gene
- Lj1g3v3975270.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3975270.2 Non Chatacterized Hit- tr|J3LTX5|J3LTX5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G4,47.52,3e-18,seg,NULL,CUFF.31663.2
(795 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74534 similar to UniRef100_A7PW44 Cluster: Chromosome... 1576 0.0
gnl|LJGI|TC80193 539 e-153
gnl|LJGI|TC74997 similar to UniRef100_A3QU26 Cluster: Cytochrome... 490 e-138
gnl|LJGI|TC73994 289 1e-77
gnl|LJGI|BP074660 149 3e-35
>gnl|LJGI|TC74534 similar to UniRef100_A7PW44 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 1472
Score = 1576 bits (795), Expect = 0.0
Identities = 795/795 (100%)
Strand = Plus / Plus
Query: 1 atggatactactaatgattgggtgctcctttctgatgatggctcccttgatggtggtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 atggatactactaatgattgggtgctcctttctgatgatggctcccttgatggtggtgat 247
Query: 61 gagaatcagattttcctgggaaaatcaaacccagaatcaaaaagtgattttgacatgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gagaatcagattttcctgggaaaatcaaacccagaatcaaaaagtgattttgacatgaat 307
Query: 121 tacttctactgcacctcaccaaaatcaagggattcttccacaacacaacttctccatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tacttctactgcacctcaccaaaatcaagggattcttccacaacacaacttctccatgat 367
Query: 181 gatccaattcaatttgtagaaaacactgaggatgatcatgttggagacaactcagacacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gatccaattcaatttgtagaaaacactgaggatgatcatgttggagacaactcagacacc 427
Query: 241 acctctgagaaaatcaaagctgttgttgtggaagctgatgaacaagaaactctttctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 acctctgagaaaatcaaagctgttgttgtggaagctgatgaacaagaaactctttctgtt 487
Query: 301 tcacagtttttcttgcagttagaaaataaatttgccgacatgaaaatggattctccaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcacagtttttcttgcagttagaaaataaatttgccgacatgaaaatggattctccaaaa 547
Query: 361 tccagtcctagagtattgtttcctcctcctcttgatgcaggtgccttgaaatttgaggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tccagtcctagagtattgtttcctcctcctcttgatgcaggtgccttgaaatttgaggac 607
Query: 421 aaaggtgaggctatggaggttatggtctctcctagaaggaaggttgagaatgaaatggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aaaggtgaggctatggaggttatggtctctcctagaaggaaggttgagaatgaaatggct 667
Query: 481 accatggactgtgacagagaagaggtggaccccactgatggtttcaatttctggaagtgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 accatggactgtgacagagaagaggtggaccccactgatggtttcaatttctggaagtgg 727
Query: 541 agcttgacaggggttggagctatctgttcttttggtgttgctgctgccaccatctgtgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 agcttgacaggggttggagctatctgttcttttggtgttgctgctgccaccatctgtgtg 787
Query: 601 ctggtttttggaagccagcaaaagaacaaattccatcagaaccataagattcagttccag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 ctggtttttggaagccagcaaaagaacaaattccatcagaaccataagattcagttccag 847
Query: 661 atctacactgatgacaagaggattaagcaagtggtacagcaagcaaccaaattgaatgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 atctacactgatgacaagaggattaagcaagtggtacagcaagcaaccaaattgaatgaa 907
Query: 721 gcaattgcggcaacaaggggtattccacttagcagagctcacataacctatggtggttat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 gcaattgcggcaacaaggggtattccacttagcagagctcacataacctatggtggttat 967
Query: 781 tatgaagcactttga 795
|||||||||||||||
Sbjct: 968 tatgaagcactttga 982
>gnl|LJGI|TC80193
Length = 493
Score = 539 bits (272), Expect = e-153
Identities = 400/440 (90%), Gaps = 22/440 (5%)
Strand = Plus / Plus
Query: 196 gtagaaaacactgaggatgat---catgttggagacaactcag---acaccacctctgag 249
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 55 gtagaaaacactgaggatgatgatcatgttggagacaactcagcagacaccacctctgag 114
Query: 250 aaaatcaaag---ctgttgttgtggaagctgatgaacaagaaactctt---------tct 297
||| |||||| |||||||||||||||||||| ||||||||||| || |||
Sbjct: 115 aaa-tcaaaggagctgttgttgtggaagctgatcaacaagaaactgttgacactgtttct 173
Query: 298 gtttcacagtttttcttgcagttagaaaataaatttgccgacatgaaaatggattctcca 357
|||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 174 gtttcacagtttctcttgcagctggaaaataattttgccgacatgaaaatggattctcca 233
Query: 358 aaatccagtcctagagtattgtttcctcctcctcttgat---gcaggtgccttgaaattt 414
|| |||||||||| |||| |||||||||||||||||||| |||||||| |||||| |
Sbjct: 234 aagtccagtcctacagtactgtttcctcctcctcttgatgatgcaggtgctatgaaatct 293
Query: 415 gaggacaaaggtgaggctatggaggttatggtctctcctagaaggaaggttgagaatgaa 474
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 294 gaggacaaaggtgaggctatggaggttatggtctctcctagaatgaaggttgagaatgaa 353
Query: 475 atggctaccatggactgtgacagagaagaggtggaccccactgatggtttcaatttctgg 534
||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 354 atgactaccatggactgtgtcagagaagagggggaccacactgatggtttcaatttctgg 413
Query: 535 aagtggagcttgacaggggttggagctatctgttcttttggtgttgctgctgccaccatc 594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 414 aagtggagcttgacaggggttggagctatctgttcttttggtgttgctgctgccacaatc 473
Query: 595 tgtgtgctggtttttggaag 614
||||||||||||||||||||
Sbjct: 474 tgtgtgctggtttttggaag 493
>gnl|LJGI|TC74997 similar to UniRef100_A3QU26 Cluster: Cytochrome c oxidase subunit
3; n=1; Epiperipatus biolleyi|Rep: Cytochrome c oxidase
subunit 3 - Epiperipatus biolleyi, partial (8%)
Length = 541
Score = 490 bits (247), Expect = e-138
Identities = 254/255 (99%), Gaps = 1/255 (0%)
Strand = Plus / Plus
Query: 1 atggatactactaatgattgggtgctcctttctgatgatggctcccttgatggtggtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 atggatactactaatgattgggtgctcctttctgatgatggctcccttgatggtggtgat 346
Query: 61 gagaatcagattttcctgggaaaatcaaacccagaatcaaaaagtgattttgacatgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gagaatcagattttcctgggaaaatcaaacccagaatcaaaaagtgattttgacatgaat 406
Query: 121 tacttctactgcacctcaccaaaatcaagggattcttccacaac-acaacttctccatga 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 407 tacttctactgcacctcaccaaaatcaagggattcttccacaacaacaacttctccatga 466
Query: 180 tgatccaattcaatttgtagaaaacactgaggatgatcatgttggagacaactcagacac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tgatccaattcaatttgtagaaaacactgaggatgatcatgttggagacaactcagacac 526
Query: 240 cacctctgagaaaat 254
|||||||||||||||
Sbjct: 527 cacctctgagaaaat 541
>gnl|LJGI|TC73994
Length = 694
Score = 289 bits (146), Expect = 1e-77
Identities = 172/181 (95%), Gaps = 6/181 (3%)
Strand = Plus / Plus
Query: 16 gattgggtgctcctttctgatgatggctcccttgatggtggtgatgagaatcagattttc 75
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 236 gattgggtactcctttctgatgatggctcccttgatggtggtgatgagaatcagatttgc 295
Query: 76 ctgggaaaatcaaacccagaatcaaaaagtgattttgacatgaattacttctactgcacc 135
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 296 ctgggaaaatcaaacccagaatcaaaaagtgatttggacatgaattacttctactgcacc 355
Query: 136 tcaccaaaatcaagggattctt------ccacaacacaacttctccatgatgatccaatt 189
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 356 tcaccaaaatcaagggattcttccacaaccacaacacaacttctccatgatgatccaatt 415
Query: 190 c 190
|
Sbjct: 416 c 416
Score = 218 bits (110), Expect = 4e-56
Identities = 193/220 (87%), Gaps = 18/220 (8%)
Strand = Plus / Plus
Query: 196 gtagaaaacactgaggatgat---catgttggagacaactcag---acaccacctctgag 249
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 446 gtagaaaacactgaggatgatgatcatgttggagacaactcagcagacaccacctctgag 505
Query: 250 aaaatcaaag---ctgttgttgtggaagctgatgaacaagaaactctt---------tct 297
|||||||||| |||||||||||||||||||| ||||||||||| || |||
Sbjct: 506 aaaatcaaaggagctgttgttgtggaagctgatcaacaagaaactgttgacactgtttct 565
Query: 298 gtttcacagtttttcttgcagttagaaaataaatttgccgacatgaaaatggattctcca 357
|||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 566 gtttcacagtttctcttgcagctggaaaataattttgccgacatgaaaatggattctcca 625
Query: 358 aaatccagtcctagagtattgtttcctcctcctcttgatg 397
|| |||||||||| |||| |||||||||||||||||||||
Sbjct: 626 aagtccagtcctacagtactgtttcctcctcctcttgatg 665
>gnl|LJGI|BP074660
Length = 386
Score = 149 bits (75), Expect = 3e-35
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 604 gtttttggaagccagcaaaagaacaaattccatcagaaccataagattcagttccagatc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtttttggaagccagcaaaagaacaaattccatcagaaccataagattcagttccagatc 327
Query: 664 tacactgatgacaag 678
|||||||||||||||
Sbjct: 326 tacactgatgacaag 312