Miyakogusa Predicted Gene
- Lj1g3v3975270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3975270.1 Non Chatacterized Hit- tr|J3LTX5|J3LTX5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G4,44.55,7e-18,seg,NULL,CUFF.31663.1
(843 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80193 961 0.0
gnl|LJGI|TC73994 858 0.0
gnl|LJGI|TC74534 similar to UniRef100_A7PW44 Cluster: Chromosome... 842 0.0
gnl|LJGI|TC74997 similar to UniRef100_A3QU26 Cluster: Cytochrome... 295 2e-79
gnl|LJGI|BP074660 125 5e-28
>gnl|LJGI|TC80193
Length = 493
Score = 961 bits (485), Expect = 0.0
Identities = 492/493 (99%), Gaps = 1/493 (0%)
Strand = Plus / Plus
Query: 170 aacttctccatgatgatccaattctattatttgtaccccatattgggaacaaagtagaaa 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aacttctccatgatgatccaattctattatttgtaccccatattgggaacaaagtagaaa 61
Query: 230 acactgaggatgatgatcatgttggagacaactcagcagacaccacctctgagaaaatca 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 62 acactgaggatgatgatcatgttggagacaactcagcagacaccacctctgagaaa-tca 120
Query: 290 aaggagctgttgttgtggaagctgatcaacaagaaactgttgacactgtttctgtttcac 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaggagctgttgttgtggaagctgatcaacaagaaactgttgacactgtttctgtttcac 180
Query: 350 agtttctcttgcagctggaaaataattttgccgacatgaaaatggattctccaaagtcca 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtttctcttgcagctggaaaataattttgccgacatgaaaatggattctccaaagtcca 240
Query: 410 gtcctacagtactgtttcctcctcctcttgatgatgcaggtgctatgaaatctgaggaca 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcctacagtactgtttcctcctcctcttgatgatgcaggtgctatgaaatctgaggaca 300
Query: 470 aaggtgaggctatggaggttatggtctctcctagaatgaaggttgagaatgaaatgacta 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggtgaggctatggaggttatggtctctcctagaatgaaggttgagaatgaaatgacta 360
Query: 530 ccatggactgtgtcagagaagagggggaccacactgatggtttcaatttctggaagtgga 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccatggactgtgtcagagaagagggggaccacactgatggtttcaatttctggaagtgga 420
Query: 590 gcttgacaggggttggagctatctgttcttttggtgttgctgctgccacaatctgtgtgc 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcttgacaggggttggagctatctgttcttttggtgttgctgctgccacaatctgtgtgc 480
Query: 650 tggtttttggaag 662
|||||||||||||
Sbjct: 481 tggtttttggaag 493
>gnl|LJGI|TC73994
Length = 694
Score = 858 bits (433), Expect = 0.0
Identities = 458/465 (98%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 1 atggatagtaacgattgggtactcctttctgatgatggctcccttgatggtggtgatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atggatagtaacgattgggtactcctttctgatgatggctcccttgatggtggtgatgag 283
Query: 61 aatcagattttcctgggaaaatcaaacctagaatcaaaaagtgattttgacatgaattac 120
|||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 284 aatcagatttgcctgggaaaatcaaacccagaatcaaaaagtgatttggacatgaattac 343
Query: 121 ttctactgcacctcaccaaaatcaagggattcttccacaaccacaacacaacttctccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ttctactgcacctcaccaaaatcaagggattcttccacaaccacaacacaacttctccat 403
Query: 181 gatgatccaattctattatttgtaccccatattgggaacaaagtagaaaacactgaggat 240
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 404 gatgatccaattctattatccgtaccccatatcgggaacaaagtagaaaacactgaggat 463
Query: 241 gatgatcatgttggagacaactcagcagacaccacctctgagaaaatcaaaggagctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gatgatcatgttggagacaactcagcagacaccacctctgagaaaatcaaaggagctgtt 523
Query: 301 gttgtggaagctgatcaacaagaaactgttgacactgtttctgtttcacagtttctcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gttgtggaagctgatcaacaagaaactgttgacactgtttctgtttcacagtttctcttg 583
Query: 361 cagctggaaaataattttgccgacatgaaaatggattctccaaagtccagtcctacagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cagctggaaaataattttgccgacatgaaaatggattctccaaagtccagtcctacagta 643
Query: 421 ctgtttcctcctcctcttgatgatgcaggtgctatgaaatctgag 465
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 644 ctgtttcctcctcctcttgatgatgca-gtgctatgaaatctgag 687
>gnl|LJGI|TC74534 similar to UniRef100_A7PW44 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 1472
Score = 842 bits (425), Expect = 0.0
Identities = 573/621 (92%), Gaps = 21/621 (3%)
Strand = Plus / Plus
Query: 223 gtagaaaacactgaggatgatgatcatgttggagacaactcagcagacaccacctctgag 282
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 383 gtagaaaacactgaggatgat---catgttggagacaactcag---acaccacctctgag 436
Query: 283 aaaatcaaaggagctgttgttgtggaagctgatcaacaagaaactgttgacactgtttct 342
|||||||||| |||||||||||||||||||| ||||||||||| || |||
Sbjct: 437 aaaatcaaag---ctgttgttgtggaagctgatgaacaagaaactctt---------tct 484
Query: 343 gtttcacagtttctcttgcagctggaaaataattttgccgacatgaaaatggattctcca 402
|||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||
Sbjct: 485 gtttcacagtttttcttgcagttagaaaataaatttgccgacatgaaaatggattctcca 544
Query: 403 aagtccagtcctacagtactgtttcctcctcctcttgatgatgcaggtgctatgaaatct 462
|| |||||||||| |||| |||||||||||||||||||| |||||||| |||||| |
Sbjct: 545 aaatccagtcctagagtattgtttcctcctcctcttgat---gcaggtgccttgaaattt 601
Query: 463 gaggacaaaggtgaggctatggaggttatggtctctcctagaatgaaggttgagaatgaa 522
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 602 gaggacaaaggtgaggctatggaggttatggtctctcctagaaggaaggttgagaatgaa 661
Query: 523 atgactaccatggactgtgtcagagaagagggggaccacactgatggtttcaatttctgg 582
||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 662 atggctaccatggactgtgacagagaagaggtggaccccactgatggtttcaatttctgg 721
Query: 583 aagtggagcttgacaggggttggagctatctgttcttttggtgttgctgctgccacaatc 642
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 722 aagtggagcttgacaggggttggagctatctgttcttttggtgttgctgctgccaccatc 781
Query: 643 tgtgtgctggtttttggaagcaagcaaaggaacaaattccaccagaaccataagattcag 702
||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||
Sbjct: 782 tgtgtgctggtttttggaagccagcaaaagaacaaattccatcagaaccataagattcag 841
Query: 703 ttccagatctacactgatgacaagaggattaagcaagtggtacagcaagcaaccaaattg 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ttccagatctacactgatgacaagaggattaagcaagtggtacagcaagcaaccaaattg 901
Query: 763 aataaagcaattgcggcaacaaggggtattccactgagcagagctcacataacatatggt 822
||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 902 aatgaagcaattgcggcaacaaggggtattccacttagcagagctcacataacctatggt 961
Query: 823 ggtttctatgaagctctttga 843
|||| |||||||| ||||||
Sbjct: 962 ggttattatgaagcactttga 982
Score = 297 bits (150), Expect = 6e-80
Identities = 173/181 (95%), Gaps = 6/181 (3%)
Strand = Plus / Plus
Query: 13 gattgggtactcctttctgatgatggctcccttgatggtggtgatgagaatcagattttc 72
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gattgggtgctcctttctgatgatggctcccttgatggtggtgatgagaatcagattttc 262
Query: 73 ctgggaaaatcaaacctagaatcaaaaagtgattttgacatgaattacttctactgcacc 132
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctgggaaaatcaaacccagaatcaaaaagtgattttgacatgaattacttctactgcacc 322
Query: 133 tcaccaaaatcaagggattcttccacaaccacaacacaacttctccatgatgatccaatt 192
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 323 tcaccaaaatcaagggattctt------ccacaacacaacttctccatgatgatccaatt 376
Query: 193 c 193
|
Sbjct: 377 c 377
>gnl|LJGI|TC74997 similar to UniRef100_A3QU26 Cluster: Cytochrome c oxidase subunit
3; n=1; Epiperipatus biolleyi|Rep: Cytochrome c oxidase
subunit 3 - Epiperipatus biolleyi, partial (8%)
Length = 541
Score = 295 bits (149), Expect = 2e-79
Identities = 173/181 (95%), Gaps = 5/181 (2%)
Strand = Plus / Plus
Query: 13 gattgggtactcctttctgatgatggctcccttgatggtggtgatgagaatcagattttc 72
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gattgggtgctcctttctgatgatggctcccttgatggtggtgatgagaatcagattttc 361
Query: 73 ctgggaaaatcaaacctagaatcaaaaagtgattttgacatgaattacttctactgcacc 132
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctgggaaaatcaaacccagaatcaaaaagtgattttgacatgaattacttctactgcacc 421
Query: 133 tcaccaaaatcaagggattcttccacaaccacaacacaacttctccatgatgatccaatt 192
||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 tcaccaaaatcaagggattcttccacaac-----aacaacttctccatgatgatccaatt 476
Query: 193 c 193
|
Sbjct: 477 c 477
Score = 73.8 bits (37), Expect = 2e-12
Identities = 59/65 (90%), Gaps = 6/65 (9%)
Strand = Plus / Plus
Query: 223 gtagaaaacactgaggatgatgatcatgttggagacaactcagcagacaccacctctgag 282
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 483 gtagaaaacactgaggatg---atcatgttggagacaact---cagacaccacctctgag 536
Query: 283 aaaat 287
|||||
Sbjct: 537 aaaat 541
>gnl|LJGI|BP074660
Length = 386
Score = 125 bits (63), Expect = 5e-28
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 652 gtttttggaagcaagcaaaggaacaaattccaccagaaccataagattcagttccagatc 711
|||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 386 gtttttggaagccagcaaaagaacaaattccatcagaaccataagattcagttccagatc 327
Query: 712 tacactgatgacaag 726
|||||||||||||||
Sbjct: 326 tacactgatgacaag 312