Miyakogusa Predicted Gene
- Lj1g3v3974960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3974960.1 CUFF.31618.1
(858 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74963 similar to UniRef100_A7Q0H5 Cluster: Chromosome... 462 e-129
gnl|LJGI|TC61256 weakly similar to UniRef100_Q10MP9 Cluster: Pro... 163 2e-39
>gnl|LJGI|TC74963 similar to UniRef100_A7Q0H5 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 709
Score = 462 bits (233), Expect = e-129
Identities = 423/486 (87%), Gaps = 9/486 (1%)
Strand = Plus / Plus
Query: 167 aatggtcactttgccgtcaatattttccaagcaaagctggaggaatcccggcttggcttg 226
||||||| |||||||| |||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 233 aatggtctctttgccgccaatatttcccaagcaaagctggaggagtcccggcttggcttg 292
Query: 227 atcctttgaatataccatcagggaggtcatctgtgtgcgacatttgtggagaccctttac 286
| ||| | |||||||||||||| || ||||||||||| ||||||||||||||||||||||
Sbjct: 293 accctcttaatataccatcaggaagttcatctgtgtgtgacatttgtggagaccctttac 352
Query: 287 tattcctgcttcaggtctatgcaccaattgttgaggagaaatgtgaaaatacatttcacc 346
|||||||||||||| ||||| |||| || |||| |||| || |||||||
Sbjct: 353 agttcctgcttcaggtttatgcgccaactg------agaag---gaaaccacgtttcacc 403
Query: 347 ggatgctgtttgttttcatgtgtccttccatgacatgtcttcttagggatcagcatgagc 406
|||||||||||||||| || |||||||| |||||||||||||| ||||||||||||||||
Sbjct: 404 ggatgctgtttgtttttatatgtccttctatgacatgtcttctcagggatcagcatgagc 463
Query: 407 aatgtaaacgtcatccggaaagaccatctagaagtgtgaaggttttccgttgtcagctac 466
|||| ||||| || || ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 464 aatggaaacgccaccctgaaagaccatctagaagtgtgaaggttttccgttgtcagttac 523
Query: 467 ctcgtgtcaatccgttttactcaagcaaacaccctacgaatgatggaagtcaaaaacctg 526
|| |||| |||||||||||||||||| || ||||| | |||||||||| || || ||||
Sbjct: 524 cttgtgttaatccgttttactcaagcgaatgccctaaggatgatggaagccacaagcctg 583
Query: 527 ctggcagtggagccgcactttgtgattggtgtggtacctggaaaggagataagctctgta 586
| ||||||||| || ||||||||||||||||| || |||||||| |||||||||||||
Sbjct: 584 ccaccagtggagctgctctttgtgattggtgtggcacttggaaaggtgataagctctgta 643
Query: 587 gtagttgcaagcaagtgcggtattgctcagagaagcatcaggttatgagttggcgctcag 646
||||||||| |||||||||||||||| || || || ||||| ||||||||||||||||
Sbjct: 644 gtagttgcagacaagtgcggtattgctgtgaaaaacaccaggtcatgagttggcgctcag 703
Query: 647 ggcata 652
||||||
Sbjct: 704 ggcata 709
>gnl|LJGI|TC61256 weakly similar to UniRef100_Q10MP9 Cluster: Programmed cell death
protein 2, C-terminal domain containing protein,
expressed; n=1; Oryza sativa Japonica Group|Rep:
Programmed cell death protein 2, C-terminal domain
containing protein, expressed - Oryza sativa subsp.
japonica (Rice), partial (25%)
Length = 764
Score = 163 bits (82), Expect = 2e-39
Identities = 150/172 (87%), Gaps = 3/172 (1%)
Strand = Plus / Plus
Query: 644 cagggcataaaattgcttgccagcagatgaaagtttcctcacctgtttgtggacccaaca 703
|||||||||||||||||||||||||||| |||||||| ||| ||||| ||||||||||||
Sbjct: 1 cagggcataaaattgcttgccagcagataaaagtttcttcatctgttagtggacccaaca 60
Query: 704 gaagtggaaccacctctttggagtctcataaagttggcagcagcaactttatgtggcctg 763
||||| ||| ||||| |||||||||| ||| ||||| |||| ||| | |||||||||
Sbjct: 61 aaagtgtaacaacctcattggagtctcgtaaggttggaagcaacaa---tgtgtggcctg 117
Query: 764 aatatgagatcatcattggagatgaaagtgaatctaacagagatgtatccga 815
||| |||||||| ||||| |||||||||||||| ||||||||| |||||||
Sbjct: 118 aatttgagatcaccattgaagatgaaagtgaatataacagagacatatccga 169