Miyakogusa Predicted Gene
- Lj1g3v3974820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3974820.1 tr|B9IJ47|B9IJ47_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_908636
PE=3,33.5,8e-17,PROTEIN_KINASE_DOM,Protein kinase, catalytic domain;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.31608.1
(2154 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60530 weakly similar to UniRef100_A7R865 Cluster: Chr... 1651 0.0
gnl|LJGI|TC66511 similar to UniRef100_A7QGS6 Cluster: Chromosome... 888 0.0
gnl|LJGI|AV421705 similar to UniRef100_A7QER0 Cluster: Chromosom... 646 0.0
gnl|LJGI|TC76703 similar to UniRef100_A7QGS2 Cluster: Chromosome... 293 2e-78
gnl|LJGI|FS356313 similar to UniRef100_A7QER0 Cluster: Chromosom... 113 5e-24
gnl|LJGI|BP085623 similar to UniRef100_A7QGS4 Cluster: Chromosom... 105 1e-21
gnl|LJGI|TC60706 82 2e-14
gnl|LJGI|TC68310 similar to UniRef100_A7QGS6 Cluster: Chromosome... 80 7e-14
gnl|LJGI|TC79254 similar to UniRef100_A7QGS6 Cluster: Chromosome... 76 1e-12
gnl|LJGI|FS330081 similar to UniRef100_A7R321 Cluster: Chromosom... 72 2e-11
>gnl|LJGI|TC60530 weakly similar to UniRef100_A7R865 Cluster: Chromosome undetermined
scaffold_2303, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_2303,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (9%)
Length = 1006
Score = 1651 bits (833), Expect = 0.0
Identities = 833/833 (100%)
Strand = Plus / Plus
Query: 1 atgtggaagggaaaacttagtcacaccatactccttctcctcctcctgttccaacaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 atgtggaagggaaaacttagtcacaccatactccttctcctcctcctgttccaacaaaac 76
Query: 61 tgcctcgccgccaaccaccaccaaccaccatgtcccccgtcatcatgcggcaaactcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tgcctcgccgccaaccaccaccaaccaccatgtcccccgtcatcatgcggcaaactcctc 136
Query: 121 aacatatcctacccattccgcctcaaaaccgacccgacccactgcggcgaccgccgctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aacatatcctacccattccgcctcaaaaccgacccgacccactgcggcgaccgccgctac 196
Query: 181 cagctagactgcgacaccaccaccaccggtccaaccctaactcttccctcaggaaaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cagctagactgcgacaccaccaccaccggtccaaccctaactcttccctcaggaaaattc 256
Query: 241 tacgtacaagaaatcgattacaagcgattcacactccaattaaccgatgcgggtgcagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tacgtacaagaaatcgattacaagcgattcacactccaattaaccgatgcgggtgcagtg 316
Query: 301 gaagacgctgcgtgctccttcatccctcgcaatttcctctaccaacgcagcttcaaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gaagacgctgcgtgctccttcatccctcgcaatttcctctaccaacgcagcttcaaggat 376
Query: 361 ttcatcggtccagatgatttcggatcagaaccgttcgttttgtcctcacatcctccatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttcatcggtccagatgatttcggatcagaaccgttcgttttgtcctcacatcctccatca 436
Query: 421 atagcttacctgaattgttccaattccgtcgctgatgatgatcctcgatacgtgaaggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atagcttacctgaattgttccaattccgtcgctgatgatgatcctcgatacgtgaaggtg 496
Query: 481 aaggtggacacgaatcggtgtggtgctcccgggtatgagaatgtctatgcggtggtggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aaggtggacacgaatcggtgtggtgctcccgggtatgagaatgtctatgcggtggtggag 556
Query: 541 ccatctgtgagtgacattagggttgggtgcggtcttgtggtggctacgctgggtcgtggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccatctgtgagtgacattagggttgggtgcggtcttgtggtggctacgctgggtcgtggt 616
Query: 601 tggaggaagggggagattgagaacgggaacgtttcctatggtgatatccataggatgctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tggaggaagggggagattgagaacgggaacgtttcctatggtgatatccataggatgctt 676
Query: 661 gttgagggagttacggtgtcgtggttgcctgtgatttgtgaagatcgctgtggaaagaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gttgagggagttacggtgtcgtggttgcctgtgatttgtgaagatcgctgtggaaagaga 736
Query: 721 accagatgcgaggttgtctatgacggtgatggtgatgaattggaatcagaaggaaaagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 accagatgcgaggttgtctatgacggtgatggtgatgaattggaatcagaaggaaaagtt 796
Query: 781 cagtgtgataagcgctattgccattacacctaccacacaactgacaagtgtgg 833
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 cagtgtgataagcgctattgccattacacctaccacacaactgacaagtgtgg 849
>gnl|LJGI|TC66511 similar to UniRef100_A7QGS6 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 707
Score = 888 bits (448), Expect = 0.0
Identities = 448/448 (100%)
Strand = Plus / Plus
Query: 1705 tacaaggctgatgtgtatagctttggaatgcttttaatggaaatggcgggtaggaggagg 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacaaggctgatgtgtatagctttggaatgcttttaatggaaatggcgggtaggaggagg 60
Query: 1765 aactcaaatcctcatgcagagcattctagccaacagtacttcccattttggatctatgat 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aactcaaatcctcatgcagagcattctagccaacagtacttcccattttggatctatgat 120
Query: 1825 cagtttcaagaagggaaagatgttgagatggaagaatatgcgtccgaagagggaaaggct 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagtttcaagaagggaaagatgttgagatggaagaatatgcgtccgaagagggaaaggct 180
Query: 1885 ttagcaaaaaagatattcatggttgcactttggtgtgttcagtttaaaccgagtgatcgt 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttagcaaaaaagatattcatggttgcactttggtgtgttcagtttaaaccgagtgatcgt 240
Query: 1945 ccttcgatgaagaaggtagtagagatgcttgaagggccaattgaaagccttgaaatgcct 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccttcgatgaagaaggtagtagagatgcttgaagggccaattgaaagccttgaaatgcct 300
Query: 2005 ccagcaaggccttctttttatccaagtgaaacatttaaacatgatggtggaagcaattct 2064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagcaaggccttctttttatccaagtgaaacatttaaacatgatggtggaagcaattct 360
Query: 2065 gaccgaacatcatggagtggttccactagttctgataggtatcttggcgaaaccttaact 2124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaccgaacatcatggagtggttccactagttctgataggtatcttggcgaaaccttaact 420
Query: 2125 aatcagtcattggagaatagtgcttgac 2152
||||||||||||||||||||||||||||
Sbjct: 421 aatcagtcattggagaatagtgcttgac 448
>gnl|LJGI|AV421705 similar to UniRef100_A7QER0 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 326
Score = 646 bits (326), Expect = 0.0
Identities = 326/326 (100%)
Strand = Plus / Plus
Query: 1274 aagattttatcagtgaagtagctaccattggaagaatacatcacattaatgtggtgcgtc 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagattttatcagtgaagtagctaccattggaagaatacatcacattaatgtggtgcgtc 60
Query: 1334 ttgttggatattgtgttgatggaaaaaagcgtgctcttgtttatgaattcatgcctaatg 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgttggatattgtgttgatggaaaaaagcgtgctcttgtttatgaattcatgcctaatg 120
Query: 1394 ggtcattggacaagtacattttctctaaagaaggaagtgcctggttaagttatgatcaaa 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtcattggacaagtacattttctctaaagaaggaagtgcctggttaagttatgatcaaa 180
Query: 1454 tatatgaaatttctcttgggatagctcgtggggtggcgtatcttcatcaagggtgtgata 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatatgaaatttctcttgggatagctcgtggggtggcgtatcttcatcaagggtgtgata 240
Query: 1514 tgcaaattctgcattttgacatcaagcctcacaacattcttctagataaagatttcattc 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcaaattctgcattttgacatcaagcctcacaacattcttctagataaagatttcattc 300
Query: 1574 caaaggtttctgattttggacttgcc 1599
||||||||||||||||||||||||||
Sbjct: 301 caaaggtttctgattttggacttgcc 326
>gnl|LJGI|TC76703 similar to UniRef100_A7QGS2 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 742
Score = 293 bits (148), Expect = 2e-78
Identities = 312/366 (85%), Gaps = 3/366 (0%)
Strand = Plus / Plus
Query: 1615 aatgatagcattgtcactttgacagcagcgagaggaactttgggttacatggctccggaa 1674
||||||||||||||| |||| || ||||| || ||||| ||||||||||||||||||||
Sbjct: 4 aatgatagcattgtccctttaactgcagcaaggggaaccttgggttacatggctccggag 63
Query: 1675 ttgttctacaaaaatattggaggtgtgtcttacaaggctgatgtgtatagctttggaatg 1734
|||||||| |||||||||||||| || ||||| || || ||||| ||||||||||| |||
Sbjct: 64 ttgttctataaaaatattggaggagtatcttataaagcagatgtttatagctttggcatg 123
Query: 1735 cttttaatggaaatggcgggtaggaggaggaactcaaatcctcatgcagagcattctagc 1794
||||| ||||||||||| ||||||||| || |||||||| ||||||||||||||||||
Sbjct: 124 cttttgatggaaatggcaagtaggaggaaaaattcaaatccacatgcagagcattctagc 183
Query: 1795 caacagtacttcccattttggatctatgatcagtttcaagaagggaaagatgttgagatg 1854
||| |||||||| |||||| |||||||||||||| |||||| ||||||| |||| |
Sbjct: 184 caagtttacttccccttttgggtctatgatcagtttaaagaagtgaaagatattgaatt- 242
Query: 1855 gaagaatatgcgtccgaagagggaaaggctttagcaaaaaagatattcatggttgcactt 1914
||| |||| || ||||||| || | | ||||||||| || ||||||||| |||||
Sbjct: 243 --agaggatgcctctgaagaggaaatgattctagcaaaaagaatgttcatggtttcactt 300
Query: 1915 tggtgtgttcagtttaaaccgagtgatcgtccttcgatgaagaaggtagtagagatgctt 1974
|||||| ||||||| ||||| |||||||||||||| ||||| |||||||| |||||||||
Sbjct: 301 tggtgtattcagttcaaaccaagtgatcgtccttcaatgaacaaggtagtcgagatgctt 360
Query: 1975 gaaggg 1980
||||||
Sbjct: 361 gaaggg 366
>gnl|LJGI|FS356313 similar to UniRef100_A7QER0 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 664
Score = 113 bits (57), Expect = 5e-24
Identities = 114/133 (85%)
Strand = Plus / Minus
Query: 1619 atagcattgtcactttgacagcagcgagaggaactttgggttacatggctccggaattgt 1678
||||||||||||||||||| || || |||||||| | || || |||||||| ||||| |
Sbjct: 639 atagcattgtcactttgactgcggcaagaggaaccattggctatatggctccagaattat 580
Query: 1679 tctacaaaaatattggaggtgtgtcttacaaggctgatgtgtatagctttggaatgcttt 1738
| || ||||| ||||||| ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 579 tttatcaaaatcttggaggagtgtcctataaggctgatgtatatagctttggaatgcttt 520
Query: 1739 taatggaaatggc 1751
| |||||||||||
Sbjct: 519 tgatggaaatggc 507
>gnl|LJGI|BP085623 similar to UniRef100_A7QGS4 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 513
Score = 105 bits (53), Expect = 1e-21
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 1676 tgttctacaaaaatattggaggtgtgtcttacaaggctgatgtgtatagctttggaatgc 1735
||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||
Sbjct: 513 tgttctacaaaaatattggtggtgtgtcttataagnctgatgtctatagctttggaatgc 454
Query: 1736 ttttaatggaaatggc 1751
|||| ||||| |||||
Sbjct: 453 ttttgatggagatggc 438
>gnl|LJGI|TC60706
Length = 817
Score = 81.8 bits (41), Expect = 2e-14
Identities = 83/97 (85%)
Strand = Plus / Plus
Query: 76 caccaccaaccaccatgtcccccgtcatcatgcggcaaactcctcaacatatcctaccca 135
|||||||||||||||||||| || || || ||||||||| ||| ||||||||| |||||
Sbjct: 136 caccaccaaccaccatgtccaccatcttcctgcggcaaaatccacaacatatctcaccca 195
Query: 136 ttccgcctcaaaaccgacccgacccactgcggcgacc 172
|| || |||| ||||||||| |||||||||| ||||
Sbjct: 196 tttcgtctcacaaccgacccaccccactgcggagacc 232
Score = 60.0 bits (30), Expect = 6e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 675 ggtgtcgtggttgcctgtgatttgtgaagatcgctgtg 712
||||||||||||||||||| ||||||||||||| ||||
Sbjct: 780 ggtgtcgtggttgcctgtggtttgtgaagatcggtgtg 817
>gnl|LJGI|TC68310 similar to UniRef100_A7QGS6 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 873
Score = 79.8 bits (40), Expect = 7e-14
Identities = 187/236 (79%)
Strand = Plus / Plus
Query: 1498 catcaagggtgtgatatgcaaattctgcattttgacatcaagcctcacaacattcttcta 1557
|||||||| ||||| ||||||||| | |||||||| ||||||||||||||||| |||||
Sbjct: 638 catcaaggttgtgacatgcaaattttacattttgatatcaagcctcacaacatccttctt 697
Query: 1558 gataaagatttcattccaaaggtttctgattttggacttgccaagctgtataatgtgaat 1617
||| | | || ||||| || ||||| || ||||| || || || ||||| | |
Sbjct: 698 gatgagaactttattcctaaagtttcagactttggtctcgcaaaactgtacccaattgac 757
Query: 1618 gatagcattgtcactttgacagcagcgagaggaactttgggttacatggctccggaattg 1677
|||| ||||||| ||||| ||||| |||||||| | || || |||||||| ||| |
Sbjct: 758 aatagtattgtcaaattgactgcagcaagaggaacgattggctatatggctccagaacta 817
Query: 1678 ttctacaaaaatattggaggtgtgtcttacaaggctgatgtgtatagctttggaat 1733
||||| ||||| ||||||| ||||| || ||||||||||| ||||||||||||||
Sbjct: 818 ttctatcaaaatgttggaggagtgtcctataaggctgatgtctatagctttggaat 873
Score = 67.9 bits (34), Expect = 2e-10
Identities = 97/118 (82%)
Strand = Plus / Plus
Query: 1199 ctgtgtacaaaggtaagctacgaagtggacttgatgtagccataaagatgctgaccaaat 1258
|||| |||||||| ||||| || ||||||| | ||||||| |||||||| || ||||
Sbjct: 339 ctgtttacaaaggaaagcttcgtagtggaccttttgtagccgtaaagatgttgggcaaac 398
Query: 1259 ccaatgctaatggccaagattttatcagtgaagtagctaccattggaagaatacatca 1316
| || |||||||| |||||||| || | |||||| || ||||| ||||||||||||||
Sbjct: 399 ctaaggctaatgggcaagatttcattaatgaagtcgcaaccataggaagaatacatca 456
>gnl|LJGI|TC79254 similar to UniRef100_A7QGS6 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 1242
Score = 75.8 bits (38), Expect = 1e-12
Identities = 99/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 1636 acagcagcgagaggaactttgggttacatggctccggaattgttctacaaaaatattgga 1695
||||| || |||||||| |||| |||||||| || || ||||||||||| || ||||||
Sbjct: 644 acagctgcaagaggaaccatggggtacatggcacctgagttgttctacaagaacattgga 703
Query: 1696 ggtgtgt-cttacaaggctgatgtgtatagctttggaatgcttttaatggaaatggcg 1752
|| || | | |||||||| ||||| ||||||||||||||| | || ||||||||||||
Sbjct: 704 ggcgttttcatacaaggcagatgtttatagctttggaatgttgttgatggaaatggcg 761
>gnl|LJGI|FS330081 similar to UniRef100_A7R321 Cluster: Chromosome undetermined
scaffold_475, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_475, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(29%)
Length = 821
Score = 71.9 bits (36), Expect = 2e-11
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 1177 ttgggtcaaggaggattcggatctgtgtacaaaggtaagctacgaagtggacttgatgta 1236
|||||| ||||||| | || |||||||||||||| |||||||| ||||||| | ||||
Sbjct: 530 ttgggtgaaggaggctatggctctgtgtacaaaggaaagctacgtagtggaccttttgta 589
Query: 1237 gccataaagatgctgaccaaatccaatgctaatggccaagattttatcagtgaagtagct 1296
|| |||| ||| ||| |||| | || |||||||| ||||| || || | |||||| ||
Sbjct: 590 gctgtaaaaatgttgagcaaacctaaggctaatgggcaagaattcattaatgaagttgca 649
Query: 1297 accattggaagaatacatca 1316
||||| ||||||||||||||
Sbjct: 650 accataggaagaatacatca 669