Miyakogusa Predicted Gene
- Lj1g3v3974780.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3974780.2 tr|B9GYG3|B9GYG3_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_646885
PE=4,84,2e-18,seg,NULL; no description,NULL,CUFF.31625.2
(615 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78851 similar to UniRef100_A7PSA6 Cluster: Chromosome... 474 e-133
gnl|LJGI|TC82529 similar to UniRef100_A7P2L3 Cluster: Chromosome... 343 8e-94
gnl|LJGI|TC75343 similar to UniRef100_A7P2L3 Cluster: Chromosome... 78 7e-14
>gnl|LJGI|TC78851 similar to UniRef100_A7PSA6 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 1174
Score = 474 bits (239), Expect = e-133
Identities = 314/336 (93%), Gaps = 11/336 (3%)
Strand = Plus / Plus
Query: 1 atgattcgtcgtgtaattgaagcataccggatgctatccaacttcagcccttcacaaata 60
|||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 309 atgattcgccgtgtaattgaagcataccggatgctatccaacttaagcccctcacaaata 368
Query: 61 attgaaagggaatgcttagatccctttgacaca-ccagagtgtgaagcttttgatctttt 119
|||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 369 attgaaggggaatgcttagatcccattgacaccgccagagtgtgaagcttttgatctttt 428
Query: 120 tgttaacgagcttttttgtgttggtaaagcgtgctcaaattcctgtgtggaaagagcccc 179
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 429 tgttaacgagctttattgtgttggtaaagcgtgttcaaattcctgtgtggaaagagcccc 488
Query: 180 tcattctttcacgtatgtctcttcaactggaacagctcgtgcttcttctcaa-------g 232
|||| |||||||||||||||||||||| |||||||||||||| ||||||||| |
Sbjct: 489 tcatgctttcacgtatgtctcttcaaccggaacagctcgtgcatcttctcaaggtcgcgg 548
Query: 233 ggaggattaccaagttcaacaggctgttggacagtgtcctagaaattgcattc-ttatgt 291
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 549 ggaggattaccaagttcaacaggctgttggacagtgtcctagaaattgcattcattatgt 608
Query: 292 taccccccatcacaaagaattctcttggaggagctg 327
|| ||||||||||||||||||||||||||||||||
Sbjct: 609 ta--ccccatcacaaagaattctcttggaggagctg 642
>gnl|LJGI|TC82529 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 688
Score = 343 bits (173), Expect = 8e-94
Identities = 182/185 (98%)
Strand = Plus / Plus
Query: 352 atccaggaggaacttctggagctgcaggatcctaatcttgcttctactatgagaagtcag 411
||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 150 atccaggaggaacttttggagctgcaagatcctaatcttgcttctactttgagaagtcag 209
Query: 412 caacaacgagccttagaattctgggagaaaaactggcatagtggtgcaccccttaaaata 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 caacaacgagccttagaattctgggagaaaaactggcatagtggtgcaccccttaaaata 269
Query: 472 aagcgtcttgctcgtgatcctcagaggttcatttgggcagtaggtattgcacaatcacga 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aagcgtcttgctcgtgatcctcagaggttcatttgggcagtaggtattgcacaatcacga 329
Query: 532 tgtat 536
|||||
Sbjct: 330 tgtat 334
>gnl|LJGI|TC75343 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 1178
Score = 77.8 bits (39), Expect = 7e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 356 aggaggaacttctggagctgcaggatcctaatcttgcttctac 398
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 705 aggaggaacttttggagctgcaggatcctaatcttgcttctac 747