Miyakogusa Predicted Gene

Lj1g3v3964600.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3964600.1 tr|D9XFX5|D9XFX5_STRVR Adenine-specific DNA
methylase OS=Streptomyces viridochromogenes DSM 40736 GN,34.85,0.81,
,CUFF.31578.1
         (223 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW605256 similar to UniRef100_Q4T334 Cluster: Chromosom...   264   2e-70
gnl|LJGI|FS343230 similar to UniRef100_Q6DXR5 Cluster: Predicted...    74   4e-13

>gnl|LJGI|BW605256 similar to UniRef100_Q4T334 Cluster: Chromosome undetermined
           SCAF10125, whole genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF10125,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer), partial (8%)
          Length = 486

 Score =  264 bits (133), Expect = 2e-70
 Identities = 184/201 (91%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgctcatagtggcgaggatgatgcatcccttgcgaaagcgcggtgcgacgtggtggatg 60
           ||||||| |||||||||||||  ||||||||||||| |||| |||||||||| ||||| |
Sbjct: 355 atgctcacagtggcgaggatgcggcatcccttgcgacagcgtggtgcgacgtcgtggacg 296

                                                                       
Query: 61  agggtcctcagagttcagatcgatggtgatggcgagctacggtgcagcacgctgtttgta 120
           ||||||||||||||||| |||||||||||||| |||||||||||||||||| || |||||
Sbjct: 295 agggtcctcagagttcatatcgatggtgatggtgagctacggtgcagcacgatggttgta 236

                                                                       
Query: 121 acggccgggattggagtttatgaaccagatctgatttcgatgattggcggaggagtgagg 180
           ||| |||||||||  ||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 235 acgaccgggattgaggtttaagaaccagatctgattttgatgattggcggaggagtgagg 176

                                
Query: 181 ggggtggtgaccggagaactt 201
           |||||||||||| ||||||||
Sbjct: 175 ggggtggtgaccagagaactt 155


>gnl|LJGI|FS343230 similar to UniRef100_Q6DXR5 Cluster: Predicted protein; n=1;
           Gossypium hirsutum|Rep: Predicted protein - Gossypium
           hirsutum (Upland cotton) (Gossypium mexicanum), partial
           (5%)
          Length = 708

 Score = 73.8 bits (37), Expect = 4e-13
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                    
Query: 172 ggagtgaggggggtggtgaccggagaacttgaaccaggtgg 212
           ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 121 ggagtgaggggggtggtgaccggagaacttgaatcaggtgg 81