Miyakogusa Predicted Gene
- Lj1g3v3964490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3964490.1 Non Chatacterized Hit- tr|C1E834|C1E834_MICSR
Putative uncharacterized protein OS=Micromonas sp.
(st,41.9,5e-18,seg,NULL; Sas10_Utp3_C,Sas10 C-terminal domain;
Sas10_Utp3,Sas10/Utp3/C1D; SUBFAMILY NOT NAMED,NULL;,CUFF.31604.1
(1986 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77007 similar to UniRef100_A7QAR6 Cluster: Chromosome... 1172 0.0
gnl|LJGI|FS342632 similar to UniRef100_A7QAR6 Cluster: Chromosom... 242 7e-63
gnl|LJGI|CB828648 similar to UniRef100_A7QAR6 Cluster: Chromosom... 131 2e-29
>gnl|LJGI|TC77007 similar to UniRef100_A7QAR6 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 637
Score = 1172 bits (591), Expect = 0.0
Identities = 621/636 (97%)
Strand = Plus / Plus
Query: 811 gttatggaaggaggagtgcgctattttgaattaaaacagcttcttttgctatcctattgc 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gttatggaaggaggagtgcgctattttgaattaaaacagcttcttttgctatcctattgc 61
Query: 871 caagctataaccttctaccttcttctcaagtctgaagggcatccagtccatgatcatcct 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caagctataaccttctaccttcttctcaagtctgaagggcatccagtccatgatcatcct 121
Query: 931 gtagtagctcgccttgcagagatcagggagttattggatcagataaaacaacttgacgcc 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtagtagctcgccttgcagagatcagggagttattggatcagataaaacaacttgacgcc 181
Query: 991 aaacttccagttggacttgaggatattcttaaagaaagtaatgggttagaaacagtagta 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaacttccagttggacttgaggatattcttaaagaaagtaatgggttagaaacagtagta 241
Query: 1051 aattcagataatgagaatgctccaatcacaattgattctatcactagaaaccaagagctg 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aattcagataatgagaatgctccaatcacaattgattctatcactagaaaccaagagctg 301
Query: 1111 ccactggtctctgcggaatcactagaagaagcaatgcctatcaaggtagatgagatnnnn 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccactggtctctgcggaatcactagaagaagcaatgcctatcaaggtagatgagataaaa 361
Query: 1171 nnnttggattcctcaaaggatggtgtaccaaaagcaagaaaagttaaacatcagaaggat 1230
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaattggattcctcaaaggatggtgtaccaaaagcaagaaaagttaaacatcagaaggat 421
Query: 1231 cacattggtatgcggagtttggaaatgttgacagttagagcttcccttgctgaaaaatgg 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cacattggtatgcggagtttggaaatgttgacagttagagcttcccttgctgaaaaatgg 481
Query: 1291 nnnnnnnnggttccgtccactgacactactccagttcctagcactggtctaaagcgttcg 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aaaaaaaaggttccgtccactgacactactccagttcctagcactggtctaaagcgttcg 541
Query: 1351 agaccggacaacagtcagcatggaacatctgttttcgacgatgatgctgtggggccagct 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agaccggacaacagtcagcatggaacatctgttttcgacgatgatgctgtggggccagct 601
Query: 1411 agattgtctcagggtcttcgtaaatctaatctgaag 1446
||||||||||||||||||||||||||||||||||||
Sbjct: 602 agattgtctcagggtcttcgtaaatctaatctgaag 637
>gnl|LJGI|FS342632 similar to UniRef100_A7QAR6 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 718
Score = 242 bits (122), Expect = 7e-63
Identities = 158/170 (92%)
Strand = Plus / Plus
Query: 1381 gttttcgacgatgatgctgtggggccagctagattgtctcagggtcttcgtaaatctaat 1440
||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 513 gtttttgatgatgatgctctggggccagctagattgtctgagggtcttcgtaaatctaat 572
Query: 1441 ctgaagaaacccaaggtgatttccggtgatgatgatttacctgagaaagatgatattggc 1500
|||||||||||||||||| |||| || |||||||||||||| |||| |||||| ||||||
Sbjct: 573 ctgaagaaacccaaggtggtttctggcgatgatgatttacccgagagagatgaaattggc 632
Query: 1501 gaaagacgaaggaaacatgagcttagggtgttggctagtgctggaattaa 1550
|||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 633 gaaagacgaaggaaacatgagcttagggtgctggctggtgctggaattaa 682
Score = 56.0 bits (28), Expect = 9e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1222 cagaaggatcacattggtatgcggagtttggaaatgttgacagttaga 1269
|||||||||||||||||| ||| | ||||||||||||| | |||||||
Sbjct: 399 cagaaggatcacattggtgtgcagtgtttggaaatgttaaaagttaga 446
>gnl|LJGI|CB828648 similar to UniRef100_A7QAR6 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 510
Score = 131 bits (66), Expect = 2e-29
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 1453 aaggtgatttccggtgatgatgatttacctgagaaagatgatattggcgaaagacgaagg 1512
|||||| |||| || |||||||||||||| |||| |||||| ||||||||||||||||||
Sbjct: 195 aaggtggtttctggcgatgatgatttacccgagagagatgaaattggcgaaagacgaagg 254
Query: 1513 aaacatgagcttagggtgttggctagtgctggaattaa 1550
|||||||||||||||||| ||||| |||||||||||||
Sbjct: 255 aaacatgagcttagggtgctggctggtgctggaattaa 292
Score = 115 bits (58), Expect = 1e-24
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 1633 gattcagataatgaattttacgagcaagtgaaacaactgcgagctgctaaattggctgct 1692
||||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||||
Sbjct: 366 gattcagataatgaattttacaagcaagtggaacaactgcgtgctactaaattggctgca 425
Query: 1693 aaagctgagacttactcaaggaaatcagca 1722
||||||||| |||||||||||| ||||||
Sbjct: 426 aaagctgaggtttactcaaggaagtcagca 455