Miyakogusa Predicted Gene

Lj1g3v3961390.5
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3961390.5 tr|A7STC1|A7STC1_NEMVE Predicted protein
(Fragment) OS=Nematostella vectensis GN=v1g130907 PE=3
SV=1,32.47,0.0000000000002,E3 UBIQUITIN LIGASE APC2,NULL;
CULLIN,NULL,CUFF.31583.5
         (729 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV780357 weakly similar to UniRef100_A7QEA5 Cluster: Ch...   212   2e-54

>gnl|LJGI|AV780357 weakly similar to UniRef100_A7QEA5 Cluster: Chromosome chr1
           scaffold_84, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_84, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (3%)
          Length = 613

 Score =  212 bits (107), Expect = 2e-54
 Identities = 110/111 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatgttgagttccatgatgacacatctcaaaataaggatagcatggatttagatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atggatgttgagttccatgatgacacatctcaaaataaggatagcatggatttagatgaa 562

                                                              
Query: 61  aaaggaaaaatatgcaacaatgttggtgacatggatgttgatgatgagtgc 111
           ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 563 aaaggaaaaatatgcaagaatgttggtgacatggatgttgatgatgagtgc 613