Miyakogusa Predicted Gene
- Lj1g3v3958310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3958310.1 Non Chatacterized Hit- tr|I1JD46|I1JD46_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39505
PE,90.72,0,SUBFAMILY NOT NAMED,NULL; CCR4 NOT-RELATED,NULL;
coiled-coil,NULL; Not3,Not CCR4-Not complex compone,CUFF.31717.1
(876 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60662 homologue to UniRef100_A2Q5Q7 Cluster: Not CCR4... 1275 0.0
>gnl|LJGI|TC60662 homologue to UniRef100_A2Q5Q7 Cluster: Not CCR4-Not complex
component, N-terminal; tRNA-binding arm; n=1; Medicago
truncatula|Rep: Not CCR4-Not complex component,
N-terminal; tRNA-binding arm - Medicago truncatula
(Barrel medic), partial (24%)
Length = 772
Score = 1275 bits (643), Expect = 0.0
Identities = 643/643 (100%)
Strand = Plus / Plus
Query: 1 atgggtgcgagtcgaaagcttcagggtgagatagatcgcgttctcaagaaggttcaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atgggtgcgagtcgaaagcttcagggtgagatagatcgcgttctcaagaaggttcaagaa 189
Query: 61 ggcgttgaggtcttcgatagtatctggaacaaggtttacgatacggacaatgcaaaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ggcgttgaggtcttcgatagtatctggaacaaggtttacgatacggacaatgcaaaccag 249
Query: 121 aaggagaaatttgaggcagacctcaagaaggagattaagaagctccagaggtatagagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aaggagaaatttgaggcagacctcaagaaggagattaagaagctccagaggtatagagac 309
Query: 181 caaatcaagacttggattcaatccagtgagatcaaggataagaaggttagtgcctcgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 caaatcaagacttggattcaatccagtgagatcaaggataagaaggttagtgcctcgtat 369
Query: 241 gagcaggctctggtggatgcgcggaagctaattgagcgagaaatggaaagatttaagatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gagcaggctctggtggatgcgcggaagctaattgagcgagaaatggaaagatttaagatc 429
Query: 301 tgtgagaaagaaactaagaccaaagctttctccaaagaaggcttgggtcagcagcctaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgtgagaaagaaactaagaccaaagctttctccaaagaaggcttgggtcagcagcctaag 489
Query: 361 accgatccaaaagagaaagcaaaatcagagtcaagggaatggctaaacaatgtggttgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 accgatccaaaagagaaagcaaaatcagagtcaagggaatggctaaacaatgtggttgga 549
Query: 421 gagttagaatctcaaattgatagctttgaagctgagcttgaagggctttctgtcaagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gagttagaatctcaaattgatagctttgaagctgagcttgaagggctttctgtcaagaaa 609
Query: 481 ggaaagaacaggccacccagattgacacatctagagacatcaattactcggcacaaggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggaaagaacaggccacccagattgacacatctagagacatcaattactcggcacaaggct 669
Query: 541 catataaagaaatgtgaattcattttgaggctgctagacaatgatgaattaagtcctgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 catataaagaaatgtgaattcattttgaggctgctagacaatgatgaattaagtcctgag 729
Query: 601 gaggttaatgatgtcaaagatttcttggacgactatgtagagc 643
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gaggttaatgatgtcaaagatttcttggacgactatgtagagc 772