Miyakogusa Predicted Gene
- Lj1g3v3948040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3948040.1 Non Chatacterized Hit- tr|H0VB73|H0VB73_CAVPO
Uncharacterized protein OS=Cavia porcellus
GN=LOC10072,34.68,1e-18,seg,NULL; tRNA-intron endonuclease catalytic
domain-like,tRNA intron endonuclease, catalytic domain-,CUFF.31554.1
(728 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67451 similar to UniRef100_A2Q3E8 Cluster: TRNA intro... 1443 0.0
>gnl|LJGI|TC67451 similar to UniRef100_A2Q3E8 Cluster: TRNA intron endonuclease,
catalytic C-terminal; n=1; Medicago truncatula|Rep: TRNA
intron endonuclease, catalytic C-terminal - Medicago
truncatula (Barrel medic), partial (96%)
Length = 1206
Score = 1443 bits (728), Expect = 0.0
Identities = 728/728 (100%)
Strand = Plus / Plus
Query: 1 atggcgccaagatggaaaggaaaagatgcaaaatctaaaaaggacgcagaagctgaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atggcgccaagatggaaaggaaaagatgcaaaatctaaaaaggacgcagaagctgaagct 231
Query: 61 cttaaagaacccatgtcaaagacaatatctcatctccaatcttctctagttcaatcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cttaaagaacccatgtcaaagacaatatctcatctccaatcttctctagttcaatcagat 291
Query: 121 gcttgtggatttctctctgataacagtgtacacttagcagtgggagcagaacaaattgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gcttgtggatttctctctgataacagtgtacacttagcagtgggagcagaacaaattgac 351
Query: 181 ctattcgataaagcatgctttggtcaaccggtgagaacagttgaaaaggatcaacacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctattcgataaagcatgctttggtcaaccggtgagaacagttgaaaaggatcaacacttg 411
Query: 241 tttcaattaagcttcgaggaagcattcttcctatgctgttccttaaaatgcctcaagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tttcaattaagcttcgaggaagcattcttcctatgctgttccttaaaatgcctcaagatt 471
Query: 301 attcgtggcgatttgggtcctcaaaatgatgaagagctatggcattacatgaagtccaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 attcgtggcgatttgggtcctcaaaatgatgaagagctatggcattacatgaagtccaag 531
Query: 361 aaagaagcattcccttgtttctacaaggcttactctcaccttcgaatgaaaaattgggta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aaagaagcattcccttgtttctacaaggcttactctcaccttcgaatgaaaaattgggta 591
Query: 421 gtgaaatcaggggctcagtatggtgtagactttgtagtctatcgtcatcatccggctcgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gtgaaatcaggggctcagtatggtgtagactttgtagtctatcgtcatcatccggctcgc 651
Query: 481 atccattctgagtatggcatacttgttctatcagatgaggataaaaaagatctaaatgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 atccattctgagtatggcatacttgttctatcagatgaggataaaaaagatctaaatgga 711
Query: 541 agattgggagtatggtctgatgctcattgcataactcggcttctaggaagtgttgcaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 agattgggagtatggtctgatgctcattgcataactcggcttctaggaagtgttgcaaaa 771
Query: 601 atcttattggttatgtatgtgaataaaaatggtagcagtgatgagtctccatcatgtttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 atcttattggttatgtatgtgaataaaaatggtagcagtgatgagtctccatcatgtttg 831
Query: 661 gcaaactattctgttgaagaacgcacaatcgctaggtggagtccagaactatgccgtgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 gcaaactattctgttgaagaacgcacaatcgctaggtggagtccagaactatgccgtgaa 891
Query: 721 acctagat 728
||||||||
Sbjct: 892 acctagat 899