Miyakogusa Predicted Gene

Lj1g3v3906720.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3906720.1 tr|G7K3M7|G7K3M7_MEDTR Ferredoxin OS=Medicago
truncatula GN=MTR_5g006320 PE=4 SV=1,63.54,8e-17,
,NODE_49741_length_734_cov_251.583099.path2.1
         (273 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68580 similar to UniRef100_Q8LD29 Cluster: Ferredoxin...   442   e-124

>gnl|LJGI|TC68580 similar to UniRef100_Q8LD29 Cluster: Ferredoxin; n=1; Arabidopsis
           thaliana|Rep: Ferredoxin - Arabidopsis thaliana
           (Mouse-ear cress), partial (68%)
          Length = 577

 Score =  442 bits (223), Expect = e-124
 Identities = 226/227 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaacacttcagttcacatccttctctcttttcagaccgaagaagcaccccaccacc 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   atggcaacacctcagttcacatccttctctcttttcagaccgaagaagcaccccaccacc 61

                                                                       
Query: 61  accaccctctcctccacttttcagctcaacactctgccacgcctagcttcacacaaatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  accaccctctcctccacttttcagctcaacactctgccacgcctagcttcacacaaatca 121

                                                                       
Query: 121 ccatcactaaccgtgaggtcctacaaagtggtgatcgagcacgagggtcaaactacccag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccatcactaaccgtgaggtcctacaaagtggtgatcgagcacgagggtcaaactacccag 181

                                                          
Query: 181 ctcgaagttgaacctgacgagaccattctttccaaggcattggactc 227
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctcgaagttgaacctgacgagaccattctttccaaggcattggactc 228



 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                         
Query: 228 gtgtctgcatgacttgccctgctcgtcttctcagtggatctgttga 273
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtctgcatgacttgccctgctcgtcttctcagtggatctgttga 306