Miyakogusa Predicted Gene
- Lj1g3v3904400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3904400.1 Non Chatacterized Hit- tr|J3LXE0|J3LXE0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G1,28.12,2e-16,seg,NULL; coiled-coil,NULL,CUFF.31477.1
(1341 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77711 weakly similar to UniRef100_A7QT72 Cluster: Chr... 1287 0.0
gnl|LJGI|AV771235 similar to UniRef100_Q5Y5S5 Cluster: Myb trans... 268 8e-71
>gnl|LJGI|TC77711 weakly similar to UniRef100_A7QT72 Cluster: Chromosome chr1
scaffold_166, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_166, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 1986
Score = 1287 bits (649), Expect = 0.0
Identities = 652/653 (99%)
Strand = Plus / Plus
Query: 689 atgctgttaaccccaagtcaattttgaagagtagagaaaatccctctgagcctaagcccc 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 atgctgttaaccccaagtcaattttgaagagtagagaaaatccctctgagcctaagcccc 828
Query: 749 agaaacgtgttcggttcgattctgaatgtgatggtaaaggtgatgatgaagagaatgaag 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 agaaacgtgttcggttcgattctgaatgtgatggtaaaggtgatgatgaagagaatgaag 888
Query: 809 gaaccagggatgttcgcagaaagaccacttcaatggaagaagaggaggttgaggctttaa 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 gaaccagggatgttcgcagaaagaccacttcaatggaagaagaggaggttgaggctttaa 948
Query: 869 atcagccatcaaaggcacaagaatttgcttcggccgtcccggattatattcgtaatcctt 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 atcagccatcaaaggcacaagaatttgcttcggccgtcccggattatattcgtaatcctt 1008
Query: 929 caagatacactcattatacttttgattctgcaagtgacatggatgacaaagcaaataagg 988
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1009 caagatacactcattatacttttgattctgcaagtgacatggatgacaaagccaataagg 1068
Query: 989 aagcatatatgggcttccttgcgcagatgaagggaactggatcacaggcagatgatgctt 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 aagcatatatgggcttccttgcgcagatgaagggaactggatcacaggcagatgatgctt 1128
Query: 1049 tggatgatcttccatcagttacctttatatcgaaaaagaaatctagtgatgtcactatgg 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 tggatgatcttccatcagttacctttatatcgaaaaagaaatctagtgatgtcactatgg 1188
Query: 1109 ttgagaatgagatggtatcaaggcaaaagcttgatgttggcaaggaatccatgaataaaa 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 ttgagaatgagatggtatcaaggcaaaagcttgatgttggcaaggaatccatgaataaaa 1248
Query: 1169 aagccttccctgtaagcatagctgctgcgggtgacaatgaaaacagtgatgtttgtgcaa 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 aagccttccctgtaagcatagctgctgcgggtgacaatgaaaacagtgatgtttgtgcaa 1308
Query: 1229 tggaggaggatgaaccagaagtcatggaggatgctaaaaagagttcgcagaggttgaaca 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 tggaggaggatgaaccagaagtcatggaggatgctaaaaagagttcgcagaggttgaaca 1368
Query: 1289 accgcaagtataggaagaaaccccaggagttggaggagcatgttgtgtaaccc 1341
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1369 accgcaagtataggaagaaaccccaggagttggaggagcatgttgtgtaaccc 1421
Score = 1152 bits (581), Expect = 0.0
Identities = 581/581 (100%)
Strand = Plus / Plus
Query: 87 aaccgatgacgagatcaaaaccacaccctccaccaccactcgcacccgcaaacccgaacc 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 aaccgatgacgagatcaaaaccacaccctccaccaccactcgcacccgcaaacccgaacc 223
Query: 147 cgaacaacccaaaccctacttcttctcctccgccgccgcctcttcctcttccggcttcgg 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 cgaacaacccaaaccctacttcttctcctccgccgccgcctcttcctcttccggcttcgg 283
Query: 207 cgctgagctggaagacgagctccaagatctcgacgatgatgttgatgatgatgaggacaa 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 cgctgagctggaagacgagctccaagatctcgacgatgatgttgatgatgatgaggacaa 343
Query: 267 gccggttcggcgtgaacccactaagccttccgattacgatgatgaacagtgggaaattag 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gccggttcggcgtgaacccactaagccttccgattacgatgatgaacagtgggaaattag 403
Query: 327 gtctgggattggcctcgattctacccttgatttcgaggaagaggaagatcaatatgacaa 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gtctgggattggcctcgattctacccttgatttcgaggaagaggaagatcaatatgacaa 463
Query: 387 acaggctgttggaaatgaaaactcgggggatcgggtgtatatgaaggatataactgatga 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 acaggctgttggaaatgaaaactcgggggatcgggtgtatatgaaggatataactgatga 523
Query: 447 tagagttgagatcagtccttgcgatcgggtgtatatgagggatatgactgatgatggagt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tagagttgagatcagtccttgcgatcgggtgtatatgagggatatgactgatgatggagt 583
Query: 507 tgagattagttcttgtggtgtacttccaactaagttcagagaattcgagagagacctgcg 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tgagattagttcttgtggtgtacttccaactaagttcagagaattcgagagagacctgcg 643
Query: 567 agcaaatcacatggctgcaaggattaggctgaagcaggatgaagaagcaactaaagaaat 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 agcaaatcacatggctgcaaggattaggctgaagcaggatgaagaagcaactaaagaaat 703
Query: 627 cggtgctttgcatgtctctgagaaatctccaccagatatta 667
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cggtgctttgcatgtctctgagaaatctccaccagatatta 744
Score = 67.9 bits (34), Expect = 2e-10
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 atggaagatagtttcagagtgcgagctgagaaag 34
||||||||||||||||||||||||||||||||||
Sbjct: 78 atggaagatagtttcagagtgcgagctgagaaag 111
>gnl|LJGI|AV771235 similar to UniRef100_Q5Y5S5 Cluster: Myb transcription factor; n=1;
Hordeum vulgare subsp. vulgare|Rep: Myb transcription
factor - Hordeum vulgare var. distichum (Two-rowed
barley), partial (5%)
Length = 409
Score = 268 bits (135), Expect = 8e-71
Identities = 189/207 (91%)
Strand = Plus / Minus
Query: 1135 aagcttgatgttggcaaggaatccatgaataaaaaagccttccctgtaagcatagctgct 1194
||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| ||
Sbjct: 409 aagcttgatgttggcaaggaatccatgcataaggaagccttgcctgtaagcatagcttct 350
Query: 1195 gcgggtgacaatgaaaacagtgatgtttgtgcaatggaggaggatgaaccagaagtcatg 1254
||||||||| |||||||| ||||||||||||| ||||||||||||||||| ||| |||||
Sbjct: 349 gcgggtgaccatgaaaaccgtgatgtttgtgccatggaggaggatgaacccgaactcatg 290
Query: 1255 gaggatgctaaaaagagttcgcagaggttgaacaaccgcaagtataggaagaaaccccag 1314
|||||||||||||||||||||||||||||| || ||| | ||||||||||||| ||| |
Sbjct: 289 gaggatgctaaaaagagttcgcagaggttgtaccacccccagtataggaagaaccccacg 230
Query: 1315 gagttggaggagcatgttgtgtaaccc 1341
|| ||||||||||||||||||||||||
Sbjct: 229 gacttggaggagcatgttgtgtaaccc 203