Miyakogusa Predicted Gene
- Lj1g3v3904350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3904350.1 tr|G7KX94|G7KX94_MEDTR RING finger protein
OS=Medicago truncatula GN=MTR_7g084020 PE=4
SV=1,75.56,0,RING/U-box,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; seg,NULL; zf-C3HC4,Zinc finger, C3H,CUFF.31476.1
(2232 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70938 similar to UniRef100_A7PA30 Cluster: Chromosome... 2678 0.0
gnl|LJGI|TC62366 1164 0.0
gnl|LJGI|TC64842 similar to UniRef100_A7PA30 Cluster: Chromosome... 509 e-143
>gnl|LJGI|TC70938 similar to UniRef100_A7PA30 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 1633
Score = 2678 bits (1351), Expect = 0.0
Identities = 1363/1367 (99%)
Strand = Plus / Plus
Query: 866 ccaatgttaaacagcatcaagtaggagaaaatgttgacttcactttcttaacacggaaaa 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccaatgttaaacagcatcaagtaggagaaaatgttgacttcactttcttaacacggaaaa 61
Query: 926 aggattcctttaccctgtcgcataaaaataaacaagagattgatatcacatcatgtgaca 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aggattcctttaccctgtcgcataaaaataaacaagagattgatatcacatcatgtgaca 121
Query: 986 atggatatttatgtgatcccttttctaagttcacactcacatcagatgttgatctctcag 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atggatatttatgtgatcccttttctaagttcacactcacatcagatgttgatctctcag 181
Query: 1046 tgagacatgcaatatcagatctagatggctggctggccagagctgattcaggtcttgttg 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgagacatgcaatatcagatctagatggctggctggccagagctgattcaggtcttgttg 241
Query: 1106 atgacctcgagaagcttccatatgtttgtgcggcaatgcaacaattagaacagagaaaga 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atgacctcgagaagcttccatatgtttgtgcggcaatgcaacaattagaacagagaaaga 301
Query: 1166 agtattggaatgagcttagggcttttgacagtgaaaaatcttcaaagcttattgattatg 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agtattggaatgagcttagggcttttgacagtgaaaaatcttcaaagcttattgattatg 361
Query: 1226 gacatcagataccatcaatagctgctgatgctatggatactgatgatgaaaactgttcta 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gacatcagataccatcaatagctgctgatgctatggatactgatgatgaaaactgttcta 421
Query: 1286 atggatcaagaacttcctcgacagattcccgtgacctaaataagtcaattgctggagcct 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atggatcaagaacttcctcgacagattcccgtgacctaaataagtcaattgctggagcct 481
Query: 1346 gtcaggatcaaaccttggatgtggagaaagtgtcaatggagcaggaaatgaagttgtctt 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtcaggatcaaaccttggatgtggagaaagtgtcaatggagcaggaaatgaagttgtctt 541
Query: 1406 cttcgttcgaagagaaaagtggtattcaaatggattcaaatggcattggagatgcaaagg 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cttcgttcgaagagaaaagtggtattcaaatggattcaaatggcattggagatgcaaagg 601
Query: 1466 aaaatgattcgtacaatttctatcaggctgctgatggtcagcatctgattcttcatcctc 1525
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 602 aaaatgattcgtacaatttctatcacgctgctgatggtcagcatctgattcttcatcctc 661
Query: 1526 tgaacatgaagtgtctactaaaccattatgggagctatgatacgcttcctcacagaataa 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgaacatgaagtgtctactaaaccattatgggagctatgatacgcttcctcacagaataa 721
Query: 1586 gtggaaggattctgcaattggagacagttacgcagtctgaggccatgaggaggcgttatc 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gtggaaggattctgcaattggagacagttacgcagtctgaggccatgaggaggcgttatc 781
Query: 1646 gattcctgagtcattttccattaaccacaacatttcagctttctgaaattgatttgagtg 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gattcctgagtcattttccattaaccacaacatttcagctttctgaaattgatttgagtg 841
Query: 1706 agatattgcctcctgaagcactggccccatttatggatgaaataaaaaagcgctctaatc 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 agatattgcctcctgaagcactggccccatttatggatgaaataaaaaagcgctctaatc 901
Query: 1766 agaggaaacaacttgcaaagaaggaacaaagggacaaaatgaaagctgaagcttctgcta 1825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 agaggaaacaacttgcaaagaaggaacaaagggacaaaatgaaagctgaagcttctgcta 961
Query: 1826 cttatccttttcctgtaccgagttatcagcttacttctcgtgatgatcctccgttctcca 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 cttatccttttcctgtaccgagttatcagcttacttctcgtgatgatcctccgttctcca 1021
Query: 1886 tggatgactttgaagctctggggaattcagccatgtcatcaagtcccccattggttgggg 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 tggatgactttgaagctctggggaattcagccatgtcatcaagtcccccattggttgggg 1081
Query: 1946 agagaagattgttctcgagcgttactaggcttggttttgctgctggtcatgattctccat 2005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 agagaagattgttctcgagcgttactaggcttggttttgctgctggtcatgattctccat 1141
Query: 2006 cattacaaatacaagaagaaactagcggtccatataataacaataagagcactgattctt 2065
|||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1142 cattaccaataccagaagaaactagcggtccatataataaccataagagcactgattctt 1201
Query: 2066 ctggtacagcaggttcgagaaatggggagacaccatcatactctaatgttatatctagag 2125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 ctggtacagcaggttcgagaaatggggagacaccatcatactctaatgttatatctagag 1261
Query: 2126 cagaatctaataacagcttgaatgcaccaaagacaaatgatgtggggaagaagggaaaga 2185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 cagaatctaataacagcttgaatgcaccaaagacaaatgatgtggggaagaagggaaaga 1321
Query: 2186 aacccaatcgagttcttctgtcaacagctggtgtcaggcgttattga 2232
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 aacccaatcgagttcttctgtcaacagctggtgtcaggcgttattga 1368
>gnl|LJGI|TC62366
Length = 789
Score = 1164 bits (587), Expect = 0.0
Identities = 587/587 (100%)
Strand = Plus / Plus
Query: 145 aacatcgctattggatccctccagatctccgataacccaggttcatcaactcctgctgca 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aacatcgctattggatccctccagatctccgataacccaggttcatcaactcctgctgca 262
Query: 205 gaagattctggtggaccttccgaaaaggtgacagaattagggtctccgaatggtatgaag 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaagattctggtggaccttccgaaaaggtgacagaattagggtctccgaatggtatgaag 322
Query: 265 gcttcacctccacaaaactctagaactcattctaggagttactctggaagaaggacagtt 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcttcacctccacaaaactctagaactcattctaggagttactctggaagaaggacagtt 382
Query: 325 ggatcgtccccatcgatagggagaacaggaaatagaaatcaacaggcacctgggtctgta 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggatcgtccccatcgatagggagaacaggaaatagaaatcaacaggcacctgggtctgta 442
Query: 385 aattctcatggaagcacctcttcagcagggaggaaatctcagatggtgaatggaaattac 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aattctcatggaagcacctcttcagcagggaggaaatctcagatggtgaatggaaattac 502
Query: 445 ttgctcaattttcagtatgatccaatatcccgttctcaaccaagaggtcttcctcctccc 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttgctcaattttcagtatgatccaatatcccgttctcaaccaagaggtcttcctcctccc 562
Query: 505 cctctgtcaagaaggcagaagagaaaaccatacaacaaagatttgtttttgcaagcaaat 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cctctgtcaagaaggcagaagagaaaaccatacaacaaagatttgtttttgcaagcaaat 622
Query: 565 tacaaattcatagtgctagactcaggaaattactcacctgagtcgatggatccagataaa 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tacaaattcatagtgctagactcaggaaattactcacctgagtcgatggatccagataaa 682
Query: 625 atgttgcagtgggaagatattgtatgtgtgacattttttaccccctttccagttcagtgt 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atgttgcagtgggaagatattgtatgtgtgacattttttaccccctttccagttcagtgt 742
Query: 685 ccaatttgtttggagtatcccctgtgccctcaaataacctcatgtgg 731
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ccaatttgtttggagtatcccctgtgccctcaaataacctcatgtgg 789
Score = 107 bits (54), Expect = 3e-22
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 48 ttcttcatctgtgcaatcaccaaaccctaatccccaatatggaattccaatcaa 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ttcttcatctgtgcaatcaccaaaccctaatccccaatatggaattccaatcaa 159
>gnl|LJGI|TC64842 similar to UniRef100_A7PA30 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 667
Score = 509 bits (257), Expect = e-143
Identities = 281/289 (97%)
Strand = Plus / Plus
Query: 1491 ggctgctgatggtcagcatctgattcttcatcctctgaacatgaagtgtctactaaacca 1550
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 379 ggctgctgatggtcagcatctgattcttcatcctctgaacatgaagtgtctacttcacca 438
Query: 1551 ttatgggagctatgatacgcttcctcacagaataagtggaaggattctgcaattggagac 1610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttatgggagctatgatacgcttcctcacagaataagtggaaggattctgcaattggagac 498
Query: 1611 agttacgcagtctgaggccatgaggaggcgttatcgattcctgagtcattttccattaac 1670
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agttacacagtctgaggctatgaggaggcgttatcgattcctgagtcattttccattaac 558
Query: 1671 cacaacatttcagctttctgaaattgatttgagtgagatattgcctcctgaagcactggc 1730
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cacaacattttagctttctgaaattgatttgagtgagatattgcctcctgaagcactggc 618
Query: 1731 cccatttatggatgaaataaaaaagcgctctaatcagaggaaacaactt 1779
|| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 619 cctatttatggatgaaataaataagcgctctaatctgaggaaacaactt 667