Miyakogusa Predicted Gene
- Lj1g3v3904220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3904220.1 Non Chatacterized Hit- tr|C0JP29|C0JP29_LOTJA
Putative basic helix-loop-helix protein BHLH23
OS=Lotu,100,0,coiled-coil,NULL; no description,Helix-loop-helix
domain; HLH,Helix-loop-helix domain; helix loop he,CUFF.31447.1
(1359 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69426 similar to UniRef100_Q2HUL6 Cluster: Helix-loop... 1233 0.0
gnl|LJGI|TC70433 homologue to UniRef100_Q2HUL6 Cluster: Helix-lo... 678 0.0
gnl|LJGI|TC78898 similar to UniRef100_A7PA22 Cluster: Chromosome... 92 1e-17
>gnl|LJGI|TC69426 similar to UniRef100_Q2HUL6 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (10%)
Length = 945
Score = 1233 bits (622), Expect = 0.0
Identities = 628/630 (99%)
Strand = Plus / Plus
Query: 101 tggtagaagctaagcatcacaacgaagacgacattgccattgccattgccatggctggtg 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tggtagaagctaagcatcacaacgaagacgacattgccattgccattgccatggctggtg 375
Query: 161 gtacccctcttcatttcttcaaacccatgccagaatctgaacctgactactacaacatca 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtacccctcttcatttcttcaaacccatgccagaatctgaacctgactactacaacatca 435
Query: 221 gctcagcaattgcaaacactaatggtgttaacataaacaacccctttgcttcaatttcca 280
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 436 gctcagcaattgcaaacactaatggtgttaacataaacaacccctttgctccaatttcca 495
Query: 281 acccagctaccactgatagcttcgtcatgcaccagaccctgaacatggactctttcaatc 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 acccagctaccactgatagcttcgtcatgcaccagaccctgaacatggactctttcaatc 555
Query: 341 ttgacccgtcaaattcacaaggttttttcaatagcaacagttttgaaactggatttgaca 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttgacccgtcaaattcacaaggttttttcaatagcaacagttttgaaactggatttgaca 615
Query: 401 gtggattcttcatgggtgggagcagcaacgcttcaaactcccctgctctgatgggattct 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gtggattcttcatgggtgggagcagcaacgcttcaaactcccctgctctgatgggattct 675
Query: 461 ctcagggtaatcagatgggtaccctcgatctgagttcgtgctctgagtttcctcctccgg 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ctcagggtaatcagatgggtaccctcgatctgagttcgtgctctgagtttcctcctccgg 735
Query: 521 gtcttgaacttgaagggtttggtgctccgagggctcttgaggcggcgcagcagccgacgc 580
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gtcttgaacttgaaaggtttggtgctccgagggctcttgaggcggcgcagcagccgacgc 795
Query: 581 tgtttcagaagcggagagggtcggtggagatttcgaggttggagacggtgaggaagaagg 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tgtttcagaagcggagagggtcggtggagatttcgaggttggagacggtgaggaagaagg 855
Query: 641 ggaggaagtgggaagatggggatgttgaggctgattttgatgattctggattgaattatg 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 ggaggaagtgggaagatggggatgttgaggctgattttgatgattctggattgaattatg 915
Query: 701 agtctgatgagaatgggaatgatttgaact 730
||||||||||||||||||||||||||||||
Sbjct: 916 agtctgatgagaatgggaatgatttgaact 945
Score = 121 bits (61), Expect = 1e-26
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 atggagggtttcacgcttcccctaccaccaagacctcacaccaccacccttcaatggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atggagggtttcacgcttcccctaccaccaagacctcacaccaccacccttcaatggatg 278
Query: 61 g 61
|
Sbjct: 279 g 279
>gnl|LJGI|TC70433 homologue to UniRef100_Q2HUL6 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic), partial
(23%)
Length = 599
Score = 678 bits (342), Expect = 0.0
Identities = 345/346 (99%)
Strand = Plus / Plus
Query: 1014 gacacccactcctcaaactcttccctgccgagtcaaggaggaactatatcctggtgcctt 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacacccactcctcaaactcttccctgccgagtcaaggaggaactatatcctggtgcctt 60
Query: 1074 gccaagccctaaaaaccagcctgtgaaggtggaagttagggtaagggaagggagagctgt 1133
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 gccaagccctaaaaaccagcctgtgaaggtggaagttaggttaagggaagggagagctgt 120
Query: 1134 caacattcatatgttttgtacccgcagaccaggtcttttgctttctactatgaaggcgtt 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caacattcatatgttttgtacccgcagaccaggtcttttgctttctactatgaaggcgtt 180
Query: 1194 ggacaacctcggattggatgttcagcaggctgttattagctgctttaatggctttgcttt 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggacaacctcggattggatgttcagcaggctgttattagctgctttaatggctttgcttt 240
Query: 1254 agatgtgttcagagctgagcaatgcacagaaggccaggatgtcctccctgagcaaatcaa 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatgtgttcagagctgagcaatgcacagaaggccaggatgtcctccctgagcaaatcaa 300
Query: 1314 agcagtgcttcttgattcagctggctacccgggtatggtgtgattg 1359
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcagtgcttcttgattcagctggctacccgggtatggtgtgattg 346
>gnl|LJGI|TC78898 similar to UniRef100_A7PA22 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 491
Score = 91.7 bits (46), Expect = 1e-17
Identities = 160/198 (80%)
Strand = Plus / Plus
Query: 1120 gaagggagagctgtcaacattcatatgttttgtacccgcagaccaggtcttttgctttct 1179
||||| |||||||| || || || ||||||||| |||||| ||| ||| | ||||||||
Sbjct: 92 gaaggaagagctgtgaatatccacatgttttgtgcccgcaaacccggtttgttgctttca 151
Query: 1180 actatgaaggcgttggacaacctcggattggatgttcagcaggctgttattagctgcttt 1239
|| |||| ||| ||||| || || || ||||| ||||||| |||||||| ||||| ||
Sbjct: 152 accatgagggctttggataatcttggtttggacattcagcaagctgttatcagctgtttc 211
Query: 1240 aatggctttgctttagatgtgttcagagctgagcaatgcacagaaggccaggatgtcctc 1299
||||| |||||| | ||||| || ||||||||||||||| ||||| ||||| ||||
Sbjct: 212 aatggatttgctatggatgtttttcgagctgagcaatgcaacgaaggtcaggaagtccat 271
Query: 1300 cctgagcaaatcaaagca 1317
|| ||||| |||||||||
Sbjct: 272 ccggagcacatcaaagca 289