Miyakogusa Predicted Gene

Lj1g3v3902620.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3902620.1 tr|G7KQZ2|G7KQZ2_MEDTR CONSTANS-like zinc finger
protein OS=Medicago truncatula GN=MTR_7g108150
PE=4,46.6,4e-18,B-Box-type zinc finger,Zinc finger, B-box; seg,NULL;
ZF_BBOX,Zinc finger, B-box; SUBFAMILY NOT NAMED,CUFF.31412.1
         (1155 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024568 homologue to UniRef100_A7QUS4 Cluster: Chromos...   735   0.0  

>gnl|LJGI|GO024568 homologue to UniRef100_A7QUS4 Cluster: Chromosome chr1 scaffold_180,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_180, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 662

 Score =  735 bits (371), Expect = 0.0
 Identities = 426/451 (94%), Gaps = 18/451 (3%)
 Strand = Plus / Plus

                                                                        
Query: 628  tatcagtctcctcaggtgtgggattttcagttgcagaaatctagagattgcgatgaagca 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    tatcagtctcctcaggtgtgggattttcagttgcagaaatctagagattgcgatgaagca 61

                                                                        
Query: 688  agaatggtgacatttgatggtctagaagaacctttcctatcgattcaaaactcattccaa 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   agaatggtgacatttgatggtctagaagaacctttcctatcgattcaaaactcattccaa 121

                                                                        
Query: 748  aatgttcccagtatgaattgctcaacaatcggtgatgatattctatcaagaagt------ 801
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct: 122  aatgttcccagtatgaattgctcaacaatcggtgatgatattctatcaagaagttcttca 181

                                                                        
Query: 802  ------------caccaatcggatcagtcatcatcaagccatgtgaagaagaaagaagaa 849
                        ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  caaaatttgcagcaccaatcggatcagtcatcatcaagccatgtgaagaagaaagaagaa 241

                                                                        
Query: 850  agcaacnnnnnnnctagaggtgggttgtcatcagagtccaaattcattgaatccatgaca 909
            ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  agcaacaaaaaaactagaggtgggttgtcatcagagtccaaattcattgaatccatgaca 301

                                                                        
Query: 910  tacagtgacacaaacatggtaatggagcatcttgcttgtggcaatgaaaacatgagcacc 969
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  tacagtgacacaaacatggtaatggagcatcttgcttgtggcaatgaaaacatgagcacc 361

                                                                        
Query: 970  ataaatgccaaggttagcttagaagagctagcaaagaacagggggaatgctatgttacgc 1029
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  ataaatgccaaggttagcttagaagagctagcaaagaacagggggaatgctatgttacgc 421

                                           
Query: 1030 tacaaagagaagaagaaaactcgaaggtatg 1060
            |||||||||||||||||||||||||||||||
Sbjct: 422  tacaaagagaagaagaaaactcgaaggtatg 452