Miyakogusa Predicted Gene
- Lj1g3v3892320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3892320.1 tr|A9SWX5|A9SWX5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_234309,40,0.000000000000007,FAMILY NOT NAMED,NULL;
seg,NULL; BAR/IMD domain-like,NULL,CUFF.31391.1
(1497 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66331 similar to UniRef100_Q9LW19 Cluster: Gb|AAB8066... 1245 0.0
gnl|LJGI|AV414347 similar to UniRef100_A7QUS7 Cluster: Chromosom... 751 0.0
gnl|LJGI|BP085598 125 9e-28
gnl|LJGI|TC69765 similar to UniRef100_O22799 Cluster: Uncharacte... 66 7e-10
gnl|LJGI|TC67062 similar to UniRef100_A7QUS7 Cluster: Chromosome... 66 7e-10
>gnl|LJGI|TC66331 similar to UniRef100_Q9LW19 Cluster: Gb|AAB80666.1; n=1; Arabidopsis
thaliana|Rep: Gb|AAB80666.1 - Arabidopsis thaliana
(Mouse-ear cress), partial (9%)
Length = 906
Score = 1245 bits (628), Expect = 0.0
Identities = 628/628 (100%)
Strand = Plus / Plus
Query: 870 cagtgataacacatccatccagttaccacgcccttcagctgagggactgtcacttccaca 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cagtgataacacatccatccagttaccacgcccttcagctgagggactgtcacttccaca 61
Query: 930 atttgatattttcaatgcttctgatagtaagaaaacattaagacaagctttttcaggtcc 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atttgatattttcaatgcttctgatagtaagaaaacattaagacaagctttttcaggtcc 121
Query: 990 attgactaataaaccactgtcagtaaaacctgtttcaggggcttttccacgtttaccaat 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 attgactaataaaccactgtcagtaaaacctgtttcaggggcttttccacgtttaccaat 181
Query: 1050 gccccagcctacctctccaaaagcatctcctggtacttcacctccccctgtttcctcacc 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gccccagcctacctctccaaaagcatctcctggtacttcacctccccctgtttcctcacc 241
Query: 1110 taggataagtgagttacatgagcttcctagacctcctggtgatcaatccagcaagccaat 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taggataagtgagttacatgagcttcctagacctcctggtgatcaatccagcaagccaat 301
Query: 1170 gaaatcttctcgcgtaggccactccgctccattagtattcagaaatccagatcatcccgc 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gaaatcttctcgcgtaggccactccgctccattagtattcagaaatccagatcatcccgc 361
Query: 1230 agctaataagtttccttcagttgtatcgagtggagcatctccacttccaactccacctat 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agctaataagtttccttcagttgtatcgagtggagcatctccacttccaactccacctat 421
Query: 1290 aatggtctctcggagtttttctataccctcaagtaatcagagagctatggcattgaatgt 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aatggtctctcggagtttttctataccctcaagtaatcagagagctatggcattgaatgt 481
Query: 1350 tactaatactaagtatttggatacacgccaaattccagagaaagttgaagtagctgcatc 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tactaatactaagtatttggatacacgccaaattccagagaaagttgaagtagctgcatc 541
Query: 1410 acctccgctaacacctatatcacagagagcatcaagtatatctgacctggctactcactc 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 acctccgctaacacctatatcacagagagcatcaagtatatctgacctggctactcactc 601
Query: 1470 tagtgaaatccaaggtaggagctaaatc 1497
||||||||||||||||||||||||||||
Sbjct: 602 tagtgaaatccaaggtaggagctaaatc 629
>gnl|LJGI|AV414347 similar to UniRef100_A7QUS7 Cluster: Chromosome chr1 scaffold_180,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_180, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 409
Score = 751 bits (379), Expect = 0.0
Identities = 399/409 (97%)
Strand = Plus / Plus
Query: 636 aagattacttttgtcatcatctgcagcaaagcctaatgcttatgtacttcctacccctgt 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagattacttttgtcatcatctgcagcaaagcctaatgcttatgtacttcctacccctgt 60
Query: 696 caacatcaaagaaacaaaaactagctcagccccccgcctaagtgcaagtggatcttcaca 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caacatcaaagaaacaaaaactagctcagccccccgcctaagtgcaagtggatcttcaca 120
Query: 756 taatttgtggcattcttcccctttggatgnnnnnnnnnncgagaaagatcttgttgatgg 815
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 taatttgtggcattcttcccctttggatgaaaaaaaaaacgagaaagatcttgttgatgg 180
Query: 816 taaattgtcagaaccagccatccctagagctcactctattctcaaagaaagcaacagtga 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaattgtcagaaccagccatccctagagctcactctattctcaaagaaagcaacagtga 240
Query: 876 taacacatccatccagttaccacgcccttcagctgagggactgtcacttccacaatttga 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taacacatccatccagttaccacgcccttcagctgagggactgtcacttccacaatttga 300
Query: 936 tattttcaatgcttctgatagtaagaaaacattaagacaagctttttcaggtccattgac 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tattttcaatgcttctgatagtaagaaaacattaagacaagctttttcaggtccattgac 360
Query: 996 taataaaccactgtcagtaaaacctgtttcaggggcttttccacgttta 1044
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taataaaccactgtcagtaaaacctgtttcaggggcttttccacgttta 409
>gnl|LJGI|BP085598
Length = 338
Score = 125 bits (63), Expect = 9e-28
Identities = 84/91 (92%)
Strand = Plus / Minus
Query: 1390 aaagttgaagtagctgcatcacctccgctaacacctatatcacagagagcatcaagtata 1449
|||||||||||||||||||||||||||||||| |||||||| | |||||| || ||||||
Sbjct: 338 aaagttgaagtagctgcatcacctccgctaacccctatatccccgagagcctccagtata 279
Query: 1450 tctgacctggctactcactctagtgaaatcc 1480
|||||||||||||||| ||||| ||||||||
Sbjct: 278 tctgacctggctactccctctaatgaaatcc 248
>gnl|LJGI|TC69765 similar to UniRef100_O22799 Cluster: Uncharacterized protein
At2g33490; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At2g33490 - Arabidopsis thaliana
(Mouse-ear cress), partial (22%)
Length = 681
Score = 65.9 bits (33), Expect = 7e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 atgaagcggcaatgtgatgagaaaagagacgtatatgaatatatg 45
|||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 594 atgaagcgacaatgtgatgagaaaagagatgtatatgagtatatg 638
>gnl|LJGI|TC67062 similar to UniRef100_A7QUS7 Cluster: Chromosome chr1 scaffold_180,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_180, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 944
Score = 65.9 bits (33), Expect = 7e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 atgaagcggcaatgtgatgagaaaagagacgtatatgaatatatg 45
|||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 607 atgaagcgacaatgtgatgagaaaagagatgtatatgagtatatg 651
Score = 61.9 bits (31), Expect = 1e-08
Identities = 106/131 (80%)
Strand = Plus / Plus
Query: 106 cagcagttgcaagcagctcatgatgaatataaagaggaagcaacactttgtgcttttcgg 165
|||||||||||| | |||| |||||||||| | ||||| || ||| | | || ||| ||
Sbjct: 712 cagcagttgcaaactgctcgtgatgaatatgatgaggaggctacattgtttgttttccga 771
Query: 166 ttaaaatccttgaagcaaggccagtcacgcagtctcctaacacaagcagctcgtcactat 225
|| ||||| |||| ||||| || ||||| ||||| |||||||| ||||| |||||| ||
Sbjct: 772 ttgaaatctctgaaacaaggacaatcacgtagtcttctaacacaggcagcacgtcaccat 831
Query: 226 gctgcgcagtt 236
||||| |||||
Sbjct: 832 gctgctcagtt 842