Miyakogusa Predicted Gene

Lj1g3v3891980.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3891980.1 tr|G7KW74|G7KW74_MEDTR Protein kinase family
protein OS=Medicago truncatula GN=MTR_7g083500 PE=3
SV=,78.55,0,PROTEIN_KINASE_DOM,Protein kinase, catalytic domain;
coiled-coil,NULL; seg,NULL; Protein kinase-like,CUFF.31359.1
         (1263 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66109 homologue to UniRef100_A9STC4 Cluster: Predicte...    68   1e-10
gnl|LJGI|TC63429 homologue to UniRef100_A9STC4 Cluster: Predicte...    68   1e-10
gnl|LJGI|AV423294 similar to UniRef100_Q9MAY6 Cluster: Protein k...    56   6e-07
gnl|LJGI|AV767377 similar to UniRef100_A7P231 Cluster: Chromosom...    52   9e-06

>gnl|LJGI|TC66109 homologue to UniRef100_A9STC4 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (24%)
          Length = 769

 Score = 67.9 bits (34), Expect = 1e-10
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 340 gaatttcttgtggaggttctcatgctttctcttctacatcatcccaaccttgttaatatg 399
           ||||||||||| |||||||||||||||  ||||||||| || || |||||||| ||| | 
Sbjct: 645 gaatttcttgttgaggttctcatgcttagtcttctacaccaccctaaccttgtgaatctc 704

                         
Query: 400 attgggtactgtgc 413
           ||||| ||||||||
Sbjct: 705 attggatactgtgc 718


>gnl|LJGI|TC63429 homologue to UniRef100_A9STC4 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (41%)
          Length = 1006

 Score = 67.9 bits (34), Expect = 1e-10
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 340 gaatttcttgtggaggttctcatgctttctcttctacatcatcccaaccttgttaatatg 399
           ||||||||||| |||||||||||||||  ||||||||| || || |||||||| ||| | 
Sbjct: 672 gaatttcttgttgaggttctcatgcttagtcttctacaccaccctaaccttgtgaatctc 731

                         
Query: 400 attgggtactgtgc 413
           ||||| ||||||||
Sbjct: 732 attggatactgtgc 745


>gnl|LJGI|AV423294 similar to UniRef100_Q9MAY6 Cluster: Protein kinase 1; n=1; Populus
           nigra|Rep: Protein kinase 1 - Populus nigra (Lombardy
           poplar), partial (34%)
          Length = 428

 Score = 56.0 bits (28), Expect = 6e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 500 aacctcttgattggaataccagaatgaagatagctgctgg 539
           |||| |||||||||||||| |||||||| |||||||||||
Sbjct: 231 aaccacttgattggaatacaagaatgaaaatagctgctgg 270


>gnl|LJGI|AV767377 similar to UniRef100_A7P231 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 444

 Score = 52.0 bits (26), Expect = 9e-06
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 638 atccaaaactttctgattttgggcttgcaaagtttggtccaactgg 683
           ||||||| |||| ||||||||| || |||||| |||||||||||||
Sbjct: 290 atccaaagctttttgattttggactcgcaaagcttggtccaactgg 335