Miyakogusa Predicted Gene
- Lj1g3v3891780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3891780.1 Non Chatacterized Hit- tr|I3T0G8|I3T0G8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,97.46,0,Ubiquitin-like,NULL; no description,NULL;
Rad60-SLD_2,NULL; UBIQUITIN_2,Ubiquitin supergroup,CUFF.31335.1
(357 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66108 similar to UniRef100_A7PHL4 Cluster: Chromosome... 700 0.0
gnl|LJGI|TC71439 119 1e-26
gnl|LJGI|TC58966 similar to UniRef100_A7PHL4 Cluster: Chromosome... 64 6e-10
>gnl|LJGI|TC66108 similar to UniRef100_A7PHL4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1009
Score = 700 bits (353), Expect = 0.0
Identities = 356/357 (99%)
Strand = Plus / Plus
Query: 1 atgccggaggaagaactagtggagctcaagttccgtatctacgatggatccgatattgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgccggaggaagaactagtggagctcaagttccgtatctacgatggatccgatattgga 380
Query: 61 ccctttcgttactctcctacttccactgtcgctatgctcaaggacaggatcctcgctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctttcgttactctcctacttccactgtcgctatgctcaaggacaggatcctcgctgag 440
Query: 121 tggccaaaagacaagaaaattataccaaaggccgcaaatgatataaaactgataagtgct 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggccaaaagacaagaaaaatataccaaaggccgcaaatgatataaaactgataagtgct 500
Query: 181 ggcaaaattttggagaacaacaagacagttggccagtgtagagtaccttttggtgagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcaaaattttggagaacaacaagacagttggccagtgtagagtaccttttggtgagctt 560
Query: 241 cccccagcagtaatcaccatgcatgttgtcgtccaaccatctctggcaaaagcaaaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccccagcagtaatcaccatgcatgttgtcgtccaaccatctctggcaaaagcaaaaaca 620
Query: 301 gagaaaaagctggatgaggcgcccagaaaacatttatgcgcatgttcgataatgtga 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagaaaaagctggatgaggcgcccagaaaacatttatgcgcatgttcgataatgtga 677
>gnl|LJGI|TC71439
Length = 506
Score = 119 bits (60), Expect = 1e-26
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 298 acagagaaaaagctggatgaggcgcccagaaaacatttatgcgcatgttcgataatgtga 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 acagagaaaaagctggatgaggcgcccagaaaacatttatgcgcatgttcgataatgtga 238
>gnl|LJGI|TC58966 similar to UniRef100_A7PHL4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 819
Score = 63.9 bits (32), Expect = 6e-10
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 142 ataccaaaggccgcaaatgatataaaactgataagtgctggcaaaattttggagaacaac 201
||||||||| | |||||||| | ||| |||| ||| |||| ||||| ||||| ||||||
Sbjct: 346 ataccaaagtcagcaaatgaagtgaaattgattagttctggtaaaatcttggaaaacaac 405
Query: 202 aagacagttggccagtgtagagtaccttttggtgag 237
||||| ||||| ||||||| ||| || |||||||||
Sbjct: 406 aagactgttggtcagtgtaaagtcccatttggtgag 441