Miyakogusa Predicted Gene
- Lj1g3v3870650.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3870650.2 tr|G7KF97|G7KF97_MEDTR NBS-LRR resistance protein
OS=Medicago truncatula GN=MTR_5g040900 PE=4
SV=1,60.26,1e-18,NB-ARC,NB-ARC; CG2471-PA (LP11415P),NULL;
LEUCINE-RICH REPEAT-CONTAINING PROTEIN,NULL; P-loop
contai,CUFF.31352.2
(310 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS347457 weakly similar to UniRef100_Q6TAF7 Cluster: Bl... 448 e-126
gnl|LJGI|TC61013 weakly similar to UniRef100_A7Q237 Cluster: Chr... 165 2e-40
gnl|LJGI|TC61730 weakly similar to UniRef100_Q7XBQ9 Cluster: Dis... 84 6e-16
>gnl|LJGI|FS347457 weakly similar to UniRef100_Q6TAF7 Cluster: Blight resistance
protein T118; n=1; Solanum tarijense|Rep: Blight
resistance protein T118 - Solanum tarijense, partial
(9%)
Length = 786
Score = 448 bits (226), Expect = e-126
Identities = 296/319 (92%), Gaps = 9/319 (2%)
Strand = Plus / Minus
Query: 1 atgataagaagaagatcgtggagtttcttctcagccaagaacgcctctctgatttccttt 60
||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 404 atgataagaagaagatcgtggagtttcttctcagcaaagaacgcttctcagatttccttt 345
Query: 61 ccgtttatcc--------gtctcggtggaatggggaaaacgacactttctcagatggtct 112
|||| ||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 344 ccgtctatcccatagttggtctcggtggaatggggaaaacaacactttctcagatggtct 285
Query: 113 acaatgatgatgaggtgagtcgcaatttcaatccaaagatttggatttgtgtttctgaga 172
|||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| |
Sbjct: 284 acaatgatgatggggtgagtagcaattttaatccaaagatttggatttgtgtttctgata 225
Query: 173 atttctcggtcaagggaattttgtgttccattgtaaaatatttcacagaagaagaaaagt 232
||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 224 atttctctgtcaagggaattttgtgttccattgtaaaatctatcacagaagaagaaaagt 165
Query: 233 acaataccatggatttacctgtaatacaaagaaaggtgcaagaattgttgcaaagt-aaa 291
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 164 acaataccatggatttacctgtaatacaaagaaaggtgcaagaactgttgcaaagtaaaa 105
Query: 292 gatatttgctggttctaga 310
||||||| |||||||||||
Sbjct: 104 gatatttactggttctaga 86
>gnl|LJGI|TC61013 weakly similar to UniRef100_A7Q237 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 1145
Score = 165 bits (83), Expect = 2e-40
Identities = 119/132 (90%), Gaps = 8/132 (6%)
Strand = Plus / Plus
Query: 1 atgataagaagaagatcgtggagtttcttctcagccaagaacgcctctctgatttccttt 60
||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 697 atgataagaagaagatcgtggagtttcttctcagcaaagaacgcttctcagatttccttt 756
Query: 61 ccgtttatcc--------gtctcggtggaatggggaaaacgacactttctcagatggtct 112
|||| ||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 757 ccgtctatcccatagttggtctcggtggaatggggaaaacaacactttctcagatggtct 816
Query: 113 acaatgatgatg 124
||||||||||||
Sbjct: 817 acaatgatgatg 828
>gnl|LJGI|TC61730 weakly similar to UniRef100_Q7XBQ9 Cluster: Disease resistance
protein RGA2; n=1; Solanum bulbocastanum|Rep: Disease
resistance protein RGA2 - Solanum bulbocastanum (Wild
potato), partial (17%)
Length = 1164
Score = 83.8 bits (42), Expect = 6e-16
Identities = 154/188 (81%), Gaps = 10/188 (5%)
Strand = Plus / Plus
Query: 1 atgataagaagaagatcgtggagtttcttctcagccaagaacgcctctctgatttccttt 60
|||||||| ||||||| ||||||||||||||||||||| |||| ||||| |||||||
Sbjct: 552 atgataaggagaagattatggagtttcttctcagccaagcacgcgagtctgacttccttt 611
Query: 61 ccgtttatcc----gtc----tcggtggaatggggaaaacgacactttctcagatggtct 112
|| | ||||| ||| | ||||| ||||| ||||| |||||| |||| |||||||
Sbjct: 612 ccatctatcctattgtcggcttaggtggcatgggaaaaacaacacttgctcaaatggtct 671
Query: 113 acaatgatgatgaggtgagtcgcaatttcaa-tccaaagatttggatttgtgtttctgag 171
||||||||||| |||| | |||||||||| ||||| |||||||||||||||||||
Sbjct: 672 acaatgatgatcaggtaacaagcaatttcaacatcaaag-tttggatttgtgtttctgaa 730
Query: 172 aatttctc 179
||||||||
Sbjct: 731 aatttctc 738
Score = 61.9 bits (31), Expect = 2e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 260 aaagaaaggtgcaagaattgttgcaaagt-aaagatatttgctggtt 305
|||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 816 aaagaaaggtgcaagaattgttgcaaggtaaaagatattttctggtt 862