Miyakogusa Predicted Gene

Lj1g3v3858530.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3858530.1 tr|B9GF53|B9GF53_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_752753 PE=4
SV=1,43.01,0.000000001, ,AV409313.path2.1
         (306 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV409313 UniRef100_A7P9Y0 Cluster: Chromosome chr14 sca...   583   e-166

>gnl|LJGI|AV409313 UniRef100_A7P9Y0 Cluster: Chromosome chr14 scaffold_9  whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep:, partial (1%)
          Length = 352

 Score =  583 bits (294), Expect = e-166
 Identities = 303/306 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctaatcaaagttatcactccgaaatcaaattctctgatgagcagcgcttcaataat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  atgtctaatcaaagttatcactccgaaatcaaattctctgatgagcagcgcttcaataat 106

                                                                       
Query: 61  attgttgcacaagatgaggatgccacattttcgaacttggctggaagcagcaatgataac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 attgttgcacaagatgaggatgccacattttcgaacttggctggaagcagcaatgataac 166

                                                                       
Query: 121 ccttttgtgcggcctgtgggtgccaattcttcatattcccatcccactggaagacctatt 180
           |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 167 cctttgatgcggcctgtgggtgccaatgcttcatattcccatcccactggaagacctatt 226

                                                                       
Query: 181 gcaaatgaaattactgggagtgatactcaaaatagtgaggcagataagttgcatcccttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gcaaatgaaattactgggagtgatactcaaaatagtgaggcagataagttgcatcccttt 286

                                                                       
Query: 241 ggtttattgatgtctgagcttagagatggctctcatttaaggcgtgcacaatcttccaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ggtttattgatgtctgagcttagagatggctctcatttaaggcgtgcacaatcttccaac 346

                 
Query: 301 aattct 306
           ||||||
Sbjct: 347 aattct 352