Miyakogusa Predicted Gene

Lj1g3v3858520.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3858520.1 Non Chatacterized Hit- tr|J3L7C1|J3L7C1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G5,30,2e-16,seg,NULL,CUFF.31441.1
         (1252 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO033051                                                    1334   0.0  

>gnl|LJGI|GO033051 
          Length = 685

 Score = 1334 bits (673), Expect = 0.0
 Identities = 679/681 (99%)
 Strand = Plus / Plus

                                                                        
Query: 503  gtcgctatatgcacccagctgagcaactgggtcctgtgtcttctcaccacctacaatcat 562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gtcgctatatgcacccagctgagcaactgggtcctgtgtcttctcaccacctacaatcat 60

                                                                        
Query: 563  ctgatgatctgtttggccaccattccctctctggaaacaatgggcatgtcgaaaataact 622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctgatgatctgtttggccaccattccctctctggaaacaatgggcatgtcgaaaataact 120

                                                                        
Query: 623  ggattgacccacgggtgcaacaacatcttgaagctgtgagacagagaagagacttagggg 682
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121  ggattgacccacgggtgcaacaacatcttgaagctgtgagacagagacgagacttagggg 180

                                                                        
Query: 683  atactattgcatcggcagatctaaacataccttctgctggagctcatgaagaaagttcag 742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  atactattgcatcggcagatctaaacataccttctgctggagctcatgaagaaagttcag 240

                                                                        
Query: 743  cacggggttttatggaccttcttcatcaaaagctgggtcttcaatcctcacagtcgtcaa 802
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  cacggggttttatggaccttcttcatcaaaagctgggtcttcaatcctcacagtcgtcaa 300

                                                                        
Query: 803  atgttgataaatggcaccctctttcatcaagaagtcatgacaaatcttggcatgttcctg 862
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  atgttgataaatggcaccctctttcatcaagaagtcatgacaaatcttggcatgttcctg 360

                                                                        
Query: 863  aggctagctcattaatccatccttttgaacttgcaccagatcagcaagttcatctgaatg 922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  aggctagctcattaatccatccttttgaacttgcaccagatcagcaagttcatctgaatg 420

                                                                        
Query: 923  acccatttttagaaaggtctcaaagtgctaattcaagtgccctaatgcatgatcatttga 982
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  acccatttttagaaaggtctcaaagtgctaattcaagtgccctaatgcatgatcatttga 480

                                                                        
Query: 983  ccaacatgcatattactgagcagttcaacaatctaggaaatgctgaaagaatgccacttc 1042
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  ccgacatgcatattactgagcagttcaacaatctaggaaatgctgaaagaatgccacttc 540

                                                                        
Query: 1043 ggtctagatctggatcattacttgaagagcaatcactactatctgcaaataaggatattt 1102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  ggtctagatctggatcattacttgaagagcaatcactactatctgcaaataaggatattt 600

                                                                        
Query: 1103 tacattccaattacagaattccttttcagattggtaaatcatctatggaaaaagacttgc 1162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tacattccaattacagaattccttttcagattggtaaatcatctatggaaaaagacttgc 660

                                 
Query: 1163 ttgagttggagacaaataagg 1183
            |||||||||||||||||||||
Sbjct: 661  ttgagttggagacaaataagg 681