Miyakogusa Predicted Gene
- Lj1g3v3847330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3847330.1 Non Chatacterized Hit- tr|C6TGU9|C6TGU9_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,75.38,0,FAMILY
NOT NAMED,NULL; TCP,Transcription factor TCP subgroup; seg,NULL;
TCP,Transcription factor, TC,CUFF.31312.1
(938 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62312 similar to UniRef100_A7P9X6 Cluster: Chromosome... 1497 0.0
gnl|LJGI|TC79262 homologue to UniRef100_A7P9X6 Cluster: Chromoso... 418 e-116
gnl|LJGI|TC77851 homologue to UniRef100_Q70I19 Cluster: TCP-doma... 52 6e-06
gnl|LJGI|TC73517 homologue to UniRef100_A7QEF9 Cluster: Chromoso... 52 6e-06
>gnl|LJGI|TC62312 similar to UniRef100_A7P9X6 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1366
Score = 1497 bits (755), Expect = 0.0
Identities = 755/755 (100%)
Strand = Plus / Plus
Query: 89 tgggagagaacaaaccatccgaggttaaggatttccagattgtgattgctgagaaagatg 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tgggagagaacaaaccatccgaggttaaggatttccagattgtgattgctgagaaagatg 196
Query: 149 agagcaagaagcagttggcaccaaagaggacctccaacaaggacagacacacaaaagttg 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 agagcaagaagcagttggcaccaaagaggacctccaacaaggacagacacacaaaagttg 256
Query: 209 aaggcaggggaaggaggataaggatgccagctctgtgtgcagcaagaatcttccagttga 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaggcaggggaaggaggataaggatgccagctctgtgtgcagcaagaatcttccagttga 316
Query: 269 ccagagaattaggtcacaaatctgatggtgaaaccatccagtggcttctgcagcaggctg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccagagaattaggtcacaaatctgatggtgaaaccatccagtggcttctgcagcaggctg 376
Query: 329 agccatcaatcatagcagccactggaactggaacaatcccagcatctgctttagcttctg 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agccatcaatcatagcagccactggaactggaacaatcccagcatctgctttagcttctg 436
Query: 389 ctgctggtaactctgtttcacaacaggggacctctttatctgctggtttgcaccaaaaat 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctgctggtaactctgtttcacaacaggggacctctttatctgctggtttgcaccaaaaat 496
Query: 449 ttgatgaaatgggtggtggtggtggtgccaatagtaggaccagctggggtatggttggag 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttgatgaaatgggtggtggtggtggtgccaatagtaggaccagctggggtatggttggag 556
Query: 509 ggaatttagggagaccccatgtggctacagccacaggtttatggccccatgtcactggat 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggaatttagggagaccccatgtggctacagccacaggtttatggccccatgtcactggat 616
Query: 569 ttggatttcaatcatcatcatctggtccttctaatgccaatttggccagtgagagttcaa 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttggatttcaatcatcatcatctggtccttctaatgccaatttggccagtgagagttcaa 676
Query: 629 attacctgcagaaaattgggttccctgggtttgacttgcctggtgctaccaccaacatgg 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 attacctgcagaaaattgggttccctgggtttgacttgcctggtgctaccaccaacatgg 736
Query: 689 gtcctatgagtttcacatcaattttgggtgggggcaacaaccagcacatgccaggtttgg 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtcctatgagtttcacatcaattttgggtgggggcaacaaccagcacatgccaggtttgg 796
Query: 749 agctagggttgtctcaagatggacatattggggttttgaatccacaagccctgagccaga 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 agctagggttgtctcaagatggacatattggggttttgaatccacaagccctgagccaga 856
Query: 809 tttatcagcagatgggtcaaagcagagtacaccac 843
|||||||||||||||||||||||||||||||||||
Sbjct: 857 tttatcagcagatgggtcaaagcagagtacaccac 891
Score = 107 bits (54), Expect = 1e-22
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 1 atggatcccaagggctcaaagcagcagaaccaggaggttgttccaaacttcctt 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atggatcccaagggctcaaagcagcagaaccaggaggttgttccaaacttcctt 102
Score = 79.8 bits (40), Expect = 3e-14
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 898 actcccagtaatgatgattctcaaggctcaggacagtaaa 937
||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 actcccagtaatgatgattctcaaggctcaggacagtaaa 985
>gnl|LJGI|TC79262 homologue to UniRef100_A7P9X6 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 477
Score = 418 bits (211), Expect = e-116
Identities = 211/211 (100%)
Strand = Plus / Plus
Query: 89 tgggagagaacaaaccatccgaggttaaggatttccagattgtgattgctgagaaagatg 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgggagagaacaaaccatccgaggttaaggatttccagattgtgattgctgagaaagatg 326
Query: 149 agagcaagaagcagttggcaccaaagaggacctccaacaaggacagacacacaaaagttg 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agagcaagaagcagttggcaccaaagaggacctccaacaaggacagacacacaaaagttg 386
Query: 209 aaggcaggggaaggaggataaggatgccagctctgtgtgcagcaagaatcttccagttga 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaggcaggggaaggaggataaggatgccagctctgtgtgcagcaagaatcttccagttga 446
Query: 269 ccagagaattaggtcacaaatctgatggtga 299
|||||||||||||||||||||||||||||||
Sbjct: 447 ccagagaattaggtcacaaatctgatggtga 477
Score = 107 bits (54), Expect = 1e-22
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 1 atggatcccaagggctcaaagcagcagaaccaggaggttgttccaaacttcctt 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 atggatcccaagggctcaaagcagcagaaccaggaggttgttccaaacttcctt 232
>gnl|LJGI|TC77851 homologue to UniRef100_Q70I19 Cluster: TCP-domain protein; n=1;
Antirrhinum majus subsp. majus|Rep: TCP-domain protein -
Antirrhinum majus subsp. majus, partial (30%)
Length = 607
Score = 52.0 bits (26), Expect = 6e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 295 ggtgaaaccatccagtggcttctgcagcaggctgagccatcaatcatagcagccactgga 354
|||||||||||| ||||||| || |||||||||||||| || | || || |||||||||
Sbjct: 482 ggtgaaaccatcgagtggctcctccagcaggctgagccctcggtaatcgccgccactgga 541
Query: 355 ac 356
||
Sbjct: 542 ac 543
>gnl|LJGI|TC73517 homologue to UniRef100_A7QEF9 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 811
Score = 52.0 bits (26), Expect = 6e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 278 taggtcacaaatctgatggtgaaaccatccagtggcttctgcagcaggctgagccatcaa 337
|||| ||||| || || ||||| |||||| ||||||| || ||||||||||||||| ||
Sbjct: 431 taggacacaagtccgacggtgagaccatcgagtggctcctccagcaggctgagccagcag 490
Query: 338 tcatagcagccactggaactgg 359
|||| || ||||| || |||||
Sbjct: 491 tcatcgccgccaccgggactgg 512