Miyakogusa Predicted Gene
- Lj1g3v3847240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3847240.1 tr|G7L383|G7L383_MEDTR ABC transporter I family
member OS=Medicago truncatula GN=MTR_7g028600 PE=4 S,83.03,0,seg,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL; ATPases
associated with a varie,CUFF.31314.1
(834 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76001 similar to UniRef100_A7P9X1 Cluster: Chromosome... 844 0.0
gnl|LJGI|TC75250 similar to UniRef100_A7P9X1 Cluster: Chromosome... 611 e-174
gnl|LJGI|BP042195 similar to UniRef100_A7P9X1 Cluster: Chromosom... 561 e-159
gnl|LJGI|AV770941 similar to UniRef100_A7P9X1 Cluster: Chromosom... 151 8e-36
>gnl|LJGI|TC76001 similar to UniRef100_A7P9X1 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 656
Score = 844 bits (426), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Plus
Query: 109 cttcctcttctcagaatcaactgcgctcactcctcatttgaagttagagatgttagctat 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 cttcctcttctcagaatcaactgcgctcactcctcatttgaagttagagatgttagctat 290
Query: 169 caagctccggggactcagctcaagcttctgaattcagtgactttttcacttcctgagaaa 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 caagctccggggactcagctcaagcttctgaattcagtgactttttcacttcctgagaaa 350
Query: 229 agttttggtctgattttcggacagagtggaagcgggaaaacaactctcttgcagcttctt 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 agttttggtctgattttcggacagagtggaagcgggaaaacaactctcttgcagcttctt 410
Query: 289 gctggtataaacaaaccgacatctggatctatttacatccaaaattatggggatgatgga 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gctggtataaacaaaccgacatctggatctatttacatccaaaattatggggatgatgga 470
Query: 349 agtcctagtcagtctcaagagcccttggtgccagaaagggttggcattgtcttccagttt 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 agtcctagtcagtctcaagagcccttggtgccagaaagggttggcattgtcttccagttt 530
Query: 409 cccgagaggtattttgtggctgataatgtacttgatgaagtcacttttgggtggccaagg 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 cccgagaggtattttgtggctgataatgtacttgatgaagtcacttttgggtggccaagg 590
Query: 469 caaaagggtggccatcaattgagggagaatcttgctctagggctacagagggcaattaac 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 caaaagggtggccatcaattgagggagaatcttgctctagggctacagagggcaattaac 650
Query: 529 tgggtt 534
||||||
Sbjct: 651 tgggtt 656
Score = 87.7 bits (44), Expect = 1e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 1 atggccaccactttaaatccaccaattgggttgcgcttcctcaa 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atggccaccactttaaatccaccaattgggttgcgcttcctcaa 166
>gnl|LJGI|TC75250 similar to UniRef100_A7P9X1 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 624
Score = 611 bits (308), Expect = e-174
Identities = 322/329 (97%)
Strand = Plus / Plus
Query: 506 tagggctacagagggcaattaactgggttggattaagtgggatatcgttggataaaaatc 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagggctacagagggcaattaactgggttggattaagtgggatatcgttggataaaaatc 60
Query: 566 ctcagtcgctcagtggtggttacaaacgtcgtcttgccttggcaatacaattagttcaag 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcagtcgctcagtggtggttacaaacgtcgtcttgccttggcaatacaattagttcaag 120
Query: 626 tccccgatctattgatattggatgagcctcttgctggacttgattggaaagcacgtgcag 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccccgatctattgatattggatgagcctcttgctggacttgattggaaagcacgtgcag 180
Query: 686 atgttgtgaagcttttgaagcatctnnnnnnngaattaactgtgctagttgtcagccatg 745
||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 181 atgttgtgaagcttttgaagcatctaaaaaaagaattaactgtgctagttgtcagccatg 240
Query: 746 atttgagagagtttgcaagtctagtcgatcgatcgtggaggatggaaatgggtggcaacc 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atttgagagagtttgcaagtctagtcgatcgatcgtggaggatggaaatgggtggcaacc 300
Query: 806 ttagagaggagtttctacctttataattt 834
|||||||||||||||||||||||||||||
Sbjct: 301 ttagagaggagtttctacctttataattt 329
>gnl|LJGI|BP042195 similar to UniRef100_A7P9X1 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 506
Score = 561 bits (283), Expect = e-159
Identities = 297/304 (97%)
Strand = Plus / Minus
Query: 531 ggttggattaagtgggatatcgttggataaaaatcctcagtcgctcagtggtggttacaa 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggttggattaagtgggatatcgttggataaaaatcctcagtcgctcagtggtggttacaa 334
Query: 591 acgtcgtcttgccttggcaatacaattagttcaagtccccgatctattgatattggatga 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 acgtcgtcttgccttggcaatacaattagttcaagtccccgatctattgatattggatga 274
Query: 651 gcctcttgctggacttgattggaaagcacgtgcagatgttgtgaagcttttgaagcatct 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gcctcttgctggacttgattggaaagcacgtgcagatgttgtgaagcttttgaagcatct 214
Query: 711 nnnnnnngaattaactgtgctagttgtcagccatgatttgagagagtttgcaagtctagt 770
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aaaaaaagaattaactgtgctagttgtcagccatgatttgagagagtttgcaagtctagt 154
Query: 771 cgatcgatcgtggaggatggaaatgggtggcaaccttagagaggagtttctacctttata 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cgatcgatcgtggaggatggaaatgggtggcaaccttagagaggagtttctacctttata 94
Query: 831 attt 834
||||
Sbjct: 93 attt 90
>gnl|LJGI|AV770941 similar to UniRef100_A7P9X1 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 368
Score = 151 bits (76), Expect = 8e-36
Identities = 82/84 (97%)
Strand = Plus / Minus
Query: 751 agagagtttgcaagtctagtcgatcgatcgtggaggatggaaatgggtggcaaccttaga 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 182 agagagtttgcaagtctagtcgatcgatcgtggaggatggaaatgggtggcaaccctaga 123
Query: 811 gaggagtttctacctttataattt 834
||||||||||||||||||| ||||
Sbjct: 122 gaggagtttctacctttatcattt 99
Score = 131 bits (66), Expect = 8e-30
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 660 tggacttgattggaaagcacgtgcagatgttgtgaagcttttgaagcatctnnnnnnnga 719
||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 368 tggacttgattggaaagcacgtgcagatgttgtgaagcttttgaagcatctacaaaaaga 309
Query: 720 attaactgtgctagttgtcagccatga 746
|||||||||||||||||||||||||||
Sbjct: 308 attaactgtgctagttgtcagccatga 282